source: git/doc/manual.sgml @ d3df772

RELEASE/1.2debug-cidebug-ci-sanitisersstereowalls-data
Last change on this file since d3df772 was d3df772, checked in by Olly Betts <olly@…>, 9 years ago

doc/manual.sgml: Next release will be 1.2.21 not 1.2.22.

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1<!DOCTYPE article PUBLIC "-//OASIS//DTD DocBook V4.1//EN" [
2<!ENTITY man.aven SYSTEM "aven.sgml">
3<!ENTITY man.3dtopos SYSTEM "3dtopos.sgml">
4<!ENTITY man.cad3d SYSTEM "cad3d.sgml">
5<!ENTITY man.cavern SYSTEM "cavern.sgml">
6<!ENTITY man.diffpos SYSTEM "diffpos.sgml">
7<!ENTITY man.extend SYSTEM "extend.sgml">
8<!ENTITY man.sorterr SYSTEM "sorterr.sgml">
9]>
10
11<!--
12FIXME:
13
143dfile title:
15defaults to a list of the leafnames of the <filename>.svx</filename> files specified on the
16command line (with any paths and extensions removed).
17.
18e.g.: cavern entrance.svx \data\2ndpart.svx
19.
20would give a surveytitle of 'entrance 2ndpart'.
21.
22but this may change...
23
24FIXME todo:
25mark-up of Windows Windows NT etc?
26section on "design philosophy"
27
28level sump fudge:
29
30*begin
31*data cartesian from to dx dy dz
32*sd dx dy 100 metres
33*sd dz 0.001 metres
34; upstream - downstream
35nuiping.gowiththeflow.129 dachao.upstream.105 0 0 0 ; last number is drop in height across the sump
36*end
37
38``Quick start'' section
39
40- install (by OS): unpacking, configuration (language, where support files live)
41
42- lead people through entering and processing
43a sample survey.  Take examples from surveying books and real surveys.
44
45
46<Para>The other really important commands apart from *BEGIN, *END, and
47*INCLUDE are *EQUATE and *FIX.
48</Para>
49
50<Para>*EQUATE is used to join surveys together, e.g.
51</Para>
52
53<programlisting>*equate entrance.6 adrian.1</programlisting>
54
55<Para>
56indicates that station 6 of the entrance survey was used as
57the station 1 of the Adrian's Route survey.
58</Para>
59
60<Para>*FIX is for fixing control points - for example:
61</Para>
62
63<programlisting>
64*fix 161.entrance.1    0  0  1780</programlisting>
65
66<Para>fixes the 1st point of the 'entrance' survey at the coordinates
670 (east-west), 0 (north-south), 1780 (altitude).
68</Para>
69
70
71<term>node</term>
72<listitem><para>when talking about the survey network, we talk about an
73<emphasis>n</emphasis>-node to describe the number of connections to
74a station.  So a 1-node is a station with only 1 leg to or from it
75- i.e. The end of a passage or survey. A
762-node is a typical station along a passage with a survey leg coming
77into it, and one going out.  A 3-node is a station with three legs
78joining it, e.g. at a T-junction. And so on.
79</para>
80
81-->
82
83<article Status="draft" id="index">
84 <articleinfo>
85  <Title><Application>Survex</Application> <!--VERSION-->1.2.21 Manual</Title>
86  <AuthorGroup>
87   <Author>
88    <FirstName>Olly</FirstName>
89    <SurName>Betts</SurName>
90    <AuthorBlurb><Para>
91      Olly Betts wrote most of <Application>Survex</Application>.
92    </Para></AuthorBlurb>
93    <Affiliation>
94     <Address><Email>olly@survex.com</Email></Address>
95    </Affiliation>
96   </Author>
97   <Author>
98    <SurName>Wookey</SurName>
99    <AuthorBlurb><Para>
100      Wookey is a small furry creature.
101    </Para></AuthorBlurb>
102    <Affiliation>
103     <Address><Email>wookey@survex.com</Email></Address>
104    </Affiliation>
105   </Author>
106  </AuthorGroup>
107  <copyright>
108   <year>1998-2015</year>
109   <holder role="mailto:olly@survex.com">Olly Betts</holder>
110  </copyright>
111  <Abstract>
112   <Para>
113    This is the manual for <Application>Survex</Application> - an open-source software package for
114    cave surveyors.
115   </Para>
116  </Abstract>
117 </articleinfo>
118
119<Sect1><Title>Introduction</Title>
120<?dbhtml filename="intro.htm">
121
122<Para>
123This section describes what <Application>Survex</Application> is, and outlines the scope of this
124manual.
125</Para>
126
127<Sect2><Title>About <Application>Survex</Application></Title>
128
129<Para><Application>Survex</Application> is a multi-platform open-source cave surveying
130package.
131Version 1.2 runs on UNIX, Microsoft Windows, and Mac OS X.
132We're investigating support for phones and tablets.
133</Para>
134
135<Para>We are well aware that not everyone has access to super hardware
136- often surveying projects are run on little or no budget and any
137computers used are donated.  We aim to ensure that <Application>Survex</Application> is
138feasible to use on low-spec machines.  Obviously it won't be as
139responsive, but we intend it to be usable.
140Please help us to achieve this by giving us some feedback
141if you use <Application>Survex</Application> on a slow machine.</Para>
142
143<Para><Application>Survex</Application> is capable of processing extremely complex caves very
144quickly and has a very effective, real-time cave viewer which allows
145you to rotate, zoom, and pan the cave using mouse or keyboard. We have
146tested it extensively using <Acronym>CUCC</Acronym> and <Acronym>ARGE</Acronym>'s surveys of the caves
147under the Loser Plateau in Austria (over 22,000 survey legs, and over
148120km of underground survey data). This can all be processed in around
14910 seconds on a low-end netbook.
150Survex is also used by many other survey projects around the world,
151including the
152<ulink url="http://www.oucc.org.uk/draenen/draenenmain.htm"
153>Ogof Draenen</ulink> survey, the
154<ulink url="http://www.easegill.org.uk/">Easegill</ulink> resurvey project,
155the <Acronym>OFD</Acronym> survey, the
156<!-- url="http://milos2.zoo.ox.ac.uk/~oucc/reports/surveys/surveys.htm" -->
157<ulink url="http://www.oucc.org.uk/reports/surveys/surveys.htm"
158><Acronym>OUCC</Acronym> Picos expeditions</ulink>, and the
159<ulink url="http://www.hongmeigui.net/">Hong Meigui China
160expeditions</ulink>. <!-- FIXME more? --></Para>
161
162<Para><Application>Survex</Application> is still actively being worked on.  Version 1.0 was
163complete in some sense, but development continues - initially in reshaping
164Survex into a more integrated GUI package.</Para>
165
166<Para>We encourage feedback from users on important features or problems,
167which will help to direct future development.  See the "Mailing List" section
168of this manual for the best way to contact us.</Para>
169
170</Sect2>
171
172<!--
173<Para>Because <Application>Survex</Application> is still being actively developed, this document
174has an unfortunate tendency to lag slightly behind the capabilities of the
175software. The latest version is now available on the web at <ulink
176url="http://survex.com/">http://survex.com/</ulink> - check there for latest info.
177</Para>
178-->
179
180<!--
181<Sect2><Title>Other Documentation</Title>
182
183<variablelist>
184<varlistentry>
185<term>NEWS or NEWS.txt</term>
186<listitem><Para>a list of changes of interest to
187<Application>Survex</Application> users, broken down by version number.  Consult this file
188when upgrading to find out what has changed since the version you were
189using previously.
190</Para></listitem>
191</varlistentry>
192
193<varlistentry>
194<term>ChangeLog or CHANGES.txt</term>
195<listitem><Para>a much more detailed list of changes, aimed at developers
196rather than end users.
197</Para></listitem>
198</varlistentry>
199
200<varlistentry>
201<term>BUGS or BUGS.txt</term>
202<listitem><Para>a list of known bugs.
203</Para></listitem>
204</varlistentry>
205
206<varlistentry>
207<term>TODO or TODO.txt</term>
208<listitem><Para>planned changes and enhancements.
209</Para></listitem>
210</varlistentry>
211
212FIXME: merge INSTALL* into here, then process separately and textify
213to produce INSTALL*
214
215<varlistentry>
216<term>INSTALL or INSTALL.txt</term>
217<listitem><Para>instructions for installing <Application>Survex</Application>.  The
218Microsoft Windows version comes packaged up with an installation wizard,
219so this file doesn't exist there (you just run the package and follow
220the on-screen instructions).
221</Para></listitem>
222</varlistentry>
223</variablelist>
224
225</Sect2>
226-->
227
228<Sect2><Title>About this Manual</Title>
229
230<Para>
231If there's a part of this manual you find hard to understand, please do
232let us know.  We already know Survex well, so it can be hard for us
233to spot areas where the manual doesn't given enough information, or
234doesn't explain things clearly enough to follow when you don't know what's
235going on.  It's helpful is you can suggest a better wording, but don't worry
236if you can't, just explain the problem as precisely as you can.
237</Para>
238
239<Para>
240The master version of this manual is an <acronym>SGML</acronym>
241document written using the <ulink url="http://www.docbook.org/">docbook
242<acronym>DTD</acronym></ulink>,
243and automatically converted to a number of other formats.  If
244you are going to send us <emphasis>major</emphasis> changes, it's much easier
245to include them if you work from this master.  You can get it
246from the source archive (docs/manual.sgml) or from <ulink
247url="http://survex.com/docs.html">the Survex website</ulink>.
248</Para>
249
250<Sect3><Title>Terminology</Title>
251
252<Para>Throughout this document we use British terminology for
253surveying.</Para>
254
255<variablelist>
256<varlistentry>
257<term>station</term>
258<listitem><para>a point in the cave that you survey from and/or to
259</para></listitem></varlistentry>
260
261<varlistentry>
262<term>leg</term>
263<listitem><para>a line joining two stations
264</para></listitem></varlistentry>
265
266<varlistentry>
267<term>survey</term>
268<listitem><para>a group of legs surveyed on the same trip
269</para></listitem></varlistentry>
270
271</variablelist>
272
273</Sect3>
274
275</Sect2>
276
277<!-- FIXME: Further sources of info: website, mailing lists, other docs -->
278
279</Sect1>
280
281<Sect1><Title>Getting Started</Title>
282<?dbhtml filename="getstart.htm">
283
284<Para>This section covers how to obtain the software, and how to unpack and
285install it, and how to configure it.</Para>
286
287<Sect2><Title>Obtaining <Application>Survex</Application></Title>
288
289<Para>The latest version is available from the <Application>Survex</Application> website:
290<ulink url="http://survex.com/">http://survex.com/</ulink>.  It is also
291freely redistributable, so you welcome to get a copy from someone else
292who has already downloaded it.</Para>
293
294<Para>If you want some sample data to experiment with, you can download some
295from the Survex website too:
296<ulink url="http://survex.com/software/sample.tar.gz">http://survex.com/software/sample.tar.gz</ulink></Para>
297
298</Sect2>
299
300<Sect2><Title>Installing <Application>Survex</Application></Title>
301
302<Para>The details of installation depend greatly on what platform you
303are using, so there is a separate section below for each platform.</Para>
304
305<Sect3><Title>Linux</Title>
306
307<Para>
308We supply pre-compiled versions for x86 Linux machines in RPM format
309(suitable for Redhat, Mandrake, and some other distributions).
310Survex Debian packages are available from Debian mirror sites in
311the usual way.
312</Para>
313
314<Para>
315You'll need root access to install these prebuilt packages.
316If you don't have root access you will need to build from source
317(see the next section).
318</Para>
319
320<!-- FIXME Add Gnome file association note for Linux/Unix
321<Para>On Microsoft Windows, <Application>Survex</Application> installs with
322suitable file associations so that you can drive it from the GUI.
323On UNIX you need to drive <Application>Survex</Application> from a command-line
324prompt (or set some a filemanager or graphics shell).
325</Para>
326-->
327
328</Sect3>
329
330<Sect3><Title>Other versions of UNIX</Title>
331
332<Para>For other UNIX versions you'll need to get the source code
333and compile it on your system.  Unpack the sources and read
334the file called INSTALL in the top level for details about building
335from source.
336</Para>
337
338</Sect3>
339
340<Sect3><Title>Microsoft Windows</Title>
341
342<Para>
343This version comes packaged with an installation wizard.  Just
344run the downloaded package and it will lead you through the
345installation process.  If you want the file associations to be
346set up for all user, run the installer as administrator, or as a
347user with administrator rights.
348</Para>
349
350<Para>
351The survey viewer that's part of <Application>Survex</Application> is called
352aven, and uses OpenGL for 3d rendering.
353</Para>
354
355<Para>
356If you find that 3D rendering is sometimes very slow (e.g. one user reported
357very slow performance when running full screen, while running in a window
358was fine) then try installing the OpenGL driver supplied by the manufacturer
359of your graphics card rather than the driver Microsoft supply.
360</Para>
361
362<Para>
363The installer creates a Survex group in the Programs sub-menu of the
364Start menu containing the following items:
365</Para>
366
367<ItemizedList>
368
369<ListItem><Para>Aven</Para></ListItem>
370
371<ListItem><Para>Documentation</Para></ListItem>
372
373<ListItem><Para>Uninstall Survex</Para></ListItem>
374
375</ItemizedList>
376
377<Para>
378Icons are installed for <filename>.svx</filename>, <filename>.3d</filename>, <filename>.err</filename>, and <filename>.pos</filename> files, and also for
379Compass Plot files (<filename>.plt</filename> and <filename>.plf</filename>)
380(which Survex can read). <!-- FIXME XYZ -->
381Double-clicking on a <filename>.svx</filename> file loads it for editing.  To process it to
382produce a <filename>.3d</filename> file, right click and choose "Process" from the menu.
383Double-clicking the resultant <filename>.3d</filename> file views it in aven.
384All the <Application>Survex</Application> file types can be right clicked on to give a menu of
385possible actions. 
386</Para>
387
388<VariableList>
389<VarListEntry><Term><filename>.svx</filename></Term>
390<ListItem>
391  <VariableList>
392  <VarListEntry><Term>Process</Term>
393  <ListItem><Para>
394  Process file with cavern to produce <filename>.3d</filename> file (and <filename>.err</filename> file)
395  </Para></ListItem>
396  </VarListEntry>
397  </VariableList>
398</ListItem>
399</VarListEntry>
400   
401<VarListEntry><Term><filename>.3d</filename></Term>
402<ListItem>
403  <VariableList>
404  <VarListEntry><Term>Open</Term>
405  <ListItem><Para>
406  Load file into Aven
407  </Para></ListItem>
408  </VarListEntry>
409  <VarListEntry><Term>Print</Term>
410  <ListItem><Para>
411  Send to the printer
412  </Para></ListItem>
413  </VarListEntry>
414  <VarListEntry><Term>Extend</Term>
415  <ListItem><Para>
416  Produce extended elevation
417  </Para></ListItem>
418  </VarListEntry>
419  <VarListEntry><Term>Convert to DXF</Term>
420  <ListItem><Para>
421  Convert to a DXF file (suitable for importing into many CAD packages)
422  </Para></ListItem>
423  </VarListEntry>
424  <VarListEntry><Term>Convert for hand plotting</Term>
425  <ListItem><Para>
426  Produce a <filename>.pos</filename> file listing all the stations and their coordinates
427  </Para></ListItem>
428  </VarListEntry>
429  </VariableList>
430</ListItem>
431</VarListEntry>
432
433<VarListEntry><Term><filename>.err</filename></Term>
434<ListItem>
435  <VariableList>
436  <VarListEntry><Term>Open</Term>
437  <ListItem><Para>
438  Load file into Notepad
439  </Para></ListItem>
440  </VarListEntry>
441  <VarListEntry><Term>Sort by Error</Term>
442  <ListItem><Para>
443  Sort <filename>.err</filename> file by the error in each traverse
444  </Para></ListItem>
445  </VarListEntry>
446  <VarListEntry><Term>Sort by Horizontal Error</Term>
447  <ListItem><Para>
448  Sort <filename>.err</filename> file by the horizontal error in each traverse
449  </Para></ListItem>
450  </VarListEntry>
451  <VarListEntry><Term>Sort by Vertical Error</Term>
452  <ListItem><Para>
453  Sort <filename>.err</filename> file by the vertical error in each traverse
454  </Para></ListItem>
455  </VarListEntry>
456  <VarListEntry><Term>Sort by Percentage Error</Term>
457  <ListItem><Para>
458  Sort <filename>.err</filename> file by the percentage error in each traverse
459  </Para></ListItem>
460  </VarListEntry>
461  <VarListEntry><Term>Sort by Error per Leg</Term>
462  <ListItem><Para>
463  Sort <filename>.err</filename> file by the error per leg in each traverse
464  </Para></ListItem>
465  </VarListEntry>
466  </VariableList>
467</ListItem>
468</VarListEntry>
469</VariableList>
470
471</Sect3>
472
473</Sect2>
474
475<Sect2><Title>Configuration</Title>
476
477<Sect3><Title>Selecting Your Preferred Language</Title>
478
479<Para>Survex has extensive internationalisation capabilities.  The
480language used for messages from Survex and most of the library calls
481it uses can be changed.  By default this is picked up from the
482language the operating system is set to use (from "Regional Settings"
483in Control Panel on Microsoft Windows, from the
484<systemitem>LANG</systemitem> environment variable on UNIX
485If no setting
486is found, or <Application>Survex</Application> hasn't been translated into the
487requested language, UK English is used.</Para>
488
489<Para>
490However you may want to override the language manually -
491for example if Survex isn't available in your native language
492you'll want to choose the supported language you understand best.
493</Para>
494
495<Para>
496To do this, you set the
497<systemitem>SURVEXLANG</systemitem> environment variable.  Here's a list
498of the codes currently supported:</Para>
499
500<informaltable frame="all">
501<tgroup cols="2">
502<thead>
503<row><entry>Code</entry><entry>Language</entry></row>
504</thead>
505<tbody>
506<row><entry>en</entry><entry>International English</entry></row>
507<row><entry>en_US</entry><entry>US English</entry></row>
508<row><entry>bg</entry><entry>Bulgarian</entry></row>
509<row><entry>ca</entry><entry>Catalan</entry></row>
510<row><entry>de</entry><entry>German</entry></row>
511<row><entry>de_CH</entry><entry>Swiss German</entry></row>
512<row><entry>el</entry><entry>Greek</entry></row>
513<row><entry>es</entry><entry>Spanish</entry></row>
514<row><entry>fr</entry><entry>French</entry></row>
515<row><entry>hu</entry><entry>Hungarian</entry></row>
516<row><entry>id</entry><entry>Indonesian</entry></row>
517<row><entry>it</entry><entry>Italian</entry></row>
518<row><entry>pl</entry><entry>Polish</entry></row>
519<row><entry>pt</entry><entry>Portuguese</entry></row>
520<row><entry>pt_BR</entry><entry>Brazillian Portuguese</entry></row>
521<row><entry>ro</entry><entry>Romanian</entry></row>
522<row><entry>ru</entry><entry>Russian</entry></row>
523<row><entry>sk</entry><entry>Slovak</entry></row>
524<row><entry>zh_CN</entry><entry>Chinese (Simplified)</entry></row>
525</tbody>
526</tgroup>
527</informaltable>
528
529<Para>Here are examples of how to set this environment variable to give
530messages in French (language code fr):</Para>
531
532<VariableList>
533 <VarListEntry><Term>Microsoft Windows</Term>
534   <ListItem><Para>
535For MS Windows proceed as follows (this description was written from
536MS Windows 2000, but it should be fairly similar in other versions): Open the
537Start Menu, navigate to the Settings sub-menu, and
538open Control Panel.  Open System (picture of a computer) and click on the
539Advanced tab.  Choose `Environmental Variables', and create a new one: name
540<systemitem>SURVEXLANG</systemitem>, value <systemitem>fr</systemitem>.
541Click OK and the new value should be effective immediately.
542   </Para></ListItem>
543 </VarListEntry>
544 <VarListEntry><Term>UNIX - csh/tcsh</Term>
545   <ListItem><Para><userinput>setenv SURVEXLANG fr</userinput></Para></ListItem>
546 </VarListEntry>
547 <VarListEntry><Term>UNIX - sh/bash</Term>
548   <ListItem><Para><userinput>SURVEXLANG=fr ; export SURVEXLANG</userinput></Para></ListItem>
549 </VarListEntry>
550</VariableList>
551
552<Para>If <Application>Survex</Application> isn't available in your language, you could
553help out by providing a translation.  The initial translation is
554likely to be about a day's work; after that translations for
555new or changed messages are occasionally required.  Contact us for details
556if you're interested.</Para>
557
558</Sect3>
559
560</Sect2>
561
562</Sect1>
563
564<!-- FIXME
565
566type in .svx file
567
568run cavern (through aven)
569
570run aven
571
572how to print/export etc
573
574-->
575
576<!-- FIXME perhaps move this after data files section? -->
577<Sect1><Title>Survex Programs</Title>
578<?dbhtml filename="cmdline.htm">
579
580<Sect2><Title>Standard Options</Title>
581
582<Para>All <Application>Survex</Application> programs respond to the following command line options:
583</Para>
584
585<VariableList>
586
587<VarListEntry><Term>--help</Term><listitem><Para>
588display option summary and exit
589</Para></listitem></VarListEntry>
590
591<VarListEntry><Term>--version</Term><listitem><Para>
592output version information and exit
593</Para></listitem></VarListEntry>
594
595</VariableList>
596
597</Sect2>
598
599<Sect2><Title>Short and Long Options</Title>
600
601<Para>
602Options have two forms: short (a dash followed by a single letter e.g.
603<command>cavern -p</command>) and long (two dashes followed by one or more words e.g.
604<command>cavern --percentage</command>).  The long form is generally easier to
605remember, while the short form is quicker to type.  Options are often
606available in both forms.
607</Para>
608
609<Note><Para>Command line options are case sensitive, so "-B" and "-b"
610are different (this didn't used to be the case before Survex 0.90).  Case
611sensitivity doubles the number of available short options (and is also the
612norm on UNIX).
613</Para></Note>
614</Sect2>
615
616<Sect2><Title>Filenames on the Command Line</Title>
617
618<Para>Filenames with spaces can be processed (provided your operating system
619supports them - UNIX does, and so do recent versions of Microsoft
620Windows).  You need to enclose the filename in quotes like so:
621<userinput>cavern "Spider Cave"</userinput>
622</Para>
623
624<Para>A file specified on the command line of any of the <Application>Survex</Application> suite
625of programs will be looked for as specified.  If it is not found, then the
626file is looked for with the appropriate extension appended.  So
627<userinput>cavern survey</userinput> will look first for
628<filename>survey</filename>, then for <filename>survey.svx</filename>.
629</Para>
630
631</Sect2>
632
633<Sect2><title>Command Reference</title>
634
635<refentry id="cavern">
636<?dbhtml filename="cavern.htm">
637&man.cavern;
638</refentry>
639<refentry id="aven">
640<?dbhtml filename="aven.htm">
641&man.aven;
642</refentry>
643<refentry id="x3dtopos">
644<?dbhtml filename="3dtopos.htm">
645&man.3dtopos;
646</refentry>
647<refentry id="cad3d">
648<?dbhtml filename="cad3d.htm">
649&man.cad3d;
650</refentry>
651<refentry id="diffpos">
652<?dbhtml filename="diffpos.htm">
653&man.diffpos;
654</refentry>
655<refentry id="extend">
656<?dbhtml filename="extend.htm">
657&man.extend;
658</refentry>
659<refentry id="sorterr">
660<?dbhtml filename="sorterr.htm">
661&man.sorterr;
662</refentry>
663
664</Sect2>
665
666</Sect1>
667
668<Sect1><Title><Application>Survex</Application> data files</Title>
669<?dbhtml filename="datafile.htm">
670
671<Para>Survey data is entered in the form of text files. You can use any
672text editor you like for this, so long as it has the capability of
673writing a plain ASCII text file. The data format is very flexible;
674unlike some other cave surveying software, Survex does not require
675survey legs to be rearranged to suit the computer, and the ordering
676of instrument readings on each line is fully specifiable.  So you can enter
677your data much as it appears on the survey notes, which is important
678in reducing the opportunities for transcription errors.
679</Para>
680
681<Para>
682Also all the special characters are user-definable - for example,
683the separators can be spaces and tabs, or commas (e.g. when exporting from a
684spreadsheet), etc; the decimal point can be a slash (for clarity), a comma
685(as used in continental Europe), or anything else you care to choose.
686This flexibility
687means that it should be possible to read in data from almost any sort of
688survey data file without much work.
689</Para>
690
691<Para><Application>Survex</Application> places no restrictions on you in terms of the ordering
692of survey legs. You can enter or process data in any order and <Application>Survex</Application> will
693read it all in before determining how it is connected. You can also use the
694hierarchical naming so that you do not need to worry about using the same
695station name twice.
696</Para>
697
698<!-- FIXME don't encourage separate processing -->
699<Para>The usual arrangement is to have one file which lists all the others
700that are included (e.g., <filename>161.svx</filename>). Then
701<command>cavern 161</command> will process all your data. To just process a
702section use the filename for that section, e.g. <command>cavern dtime</command>
703will process the dreamtime file/section of Kaninchenh&ouml;hle.  To
704help you out, if all legs in a survey are connected to one another
705but the survey has no fixed points, cavern
706will 'invent' a fixed point and print a warning message to this
707effect.
708</Para>
709
710<Para>
711It is up to you what data you put in which files.  You
712can have one file per trip, or per area of the cave, or just one
713file for the whole cave if you like.
714On a large survey project it makes sense to group related surveys in the
715same file or directory.
716</Para>
717<!-- FIXME: wook sez:
718
719 Point out in documentation that file structure and survey structure don't
720 have to be the same.  And in particular that folder/directory names can be
721 different.
722
723Which is partly covered above, though the last bit isn't...
724-->
725
726<!-- FIXME "Anatomy of a Survey" section -->
727<Sect2><Title>Readings</Title>
728
729<Para>Blank lines (i.e. lines consisting solely of BLANK characters)
730are ignored. The last line in the file need not be terminated by
731an end of line character. All fields on a line must be separated
732by at least one BLANK character. An OMIT character
733(default '-') indicates that a field is unused. If the field is
734not optional, then an error is given.
735</Para>
736
737</Sect2>
738
739<Sect2><Title>Survey Station Names</Title>
740
741<Para><Application>Survex</Application> has a powerful system for naming stations.  It
742uses a hierarchy of survey names, similar to the nested folders
743your computer stores files in.
744So point 6 in the entrance survey of Kaninchenh&ouml;hle
745(cave number 161) is referred to as: 161.entrance.6
746</Para>
747
748<Para>This seems a natural way to refer to station names.  It also
749means that it is very easy to include more levels, for example if you
750want to plot all the caves in the area you just list them all in
751another file, specifying a new prefix.  So to group 3 nearby caves
752on the Loser Plateau you would use a file like
753this:
754</Para>
755
756<programlisting>
757*begin Loser
758*include 161
759*include 2YrGest
760*include 145
761*end Loser</programlisting>
762
763<Para>
764The entrance series point mentioned above would now be referred
765to as: Loser.161.entrance.6
766</Para>
767
768<!--
769<Para>This may seem a tad complex but is really very natural once you
770get the hang of it.
771</Para>
772-->
773<Para>You do not have to use this system at all, and can just give all
774stations unique identifiers if you like:
775</Para>
776
777<Para>1, 2, 3, 4, 5, ... 1381, 1382
778</Para>
779
780<Para>or
781</Para>
782
783<Para>AA06, AA07, P34, ZZ6, etc.
784</Para>
785
786<!-- FIXME:
787<Para>However you'll loose the ability to handle subsurveys if you do.
788</Para>
789-->
790
791<Para>Station and survey names may contain any alphanumeric characters and
792additionally any characters in NAMES (default `_' and `-'). Alphabetic
793characters may be forced to upper or lower case by using the *case
794command. Station names may be any length - if you want to only treat
795the first few characters as significant you can get cavern to truncate
796the names using the *truncate command.
797</Para>
798
799</Sect2>
800
801<Sect2><Title>Numeric fields</Title>
802
803<Para>[&lt;MINUS&gt;|&lt;PLUS&gt;] &lt;integer part&gt; [ &lt;DECIMAL&gt;
804[ &lt;decimal fraction&gt; ] ]
805</Para>
806
807<Para>
808or [&lt;MINUS&gt;|&lt;PLUS&gt;] &lt;DECIMAL&gt; &lt;dec fraction&gt;
809</Para>
810
811<Para><!-- FIXME: put informal description first -->
812i.e. optional PLUS or MINUS sign in front, with
813optional DECIMAL character (default '.'), which may be
814embedded, leading or trailing. No spaces are allowed between the
815various elements.
816</Para>
817
818<Para>
819All of these are valid examples: +47, 23, -22, +4.5, 1.3, -0.7, +.15, .4,
820-.05
821</Para>
822
823</Sect2>
824
825<Sect2><Title>Accuracy</Title>
826
827<Para>Accuracy assessments may be provided or defaulted for any survey
828leg. These determine the distribution of loop closure errors over the
829legs in the loop. See *SD for more information.
830</Para>
831
832</Sect2>
833
834<!--
835<Sect2><Title>Survey Coordinate Range</Title>
836
837<Para>
838If we store distances to nearest 10um (0.01mm) in 4 bytes, this
839gives a range of ~20 km. This method is currently not used, but
840has several advantages (data storage space [double uses 8 bytes
841- with my C compiler], speed (unless your FP chip works in parallel
842with your CPU [e.g. the new Acorn FPU for the ARM], and numerical
843accuracy [compared to using floats at least]) and so may be adopted
844in future). Nearest 0.1mm gives -200 km, which is enough for most
845people, but may mean rounding errors become significant.
846</Para>
847
848<Para>
849I will have to do some sums...
850</Para>
851
852</Sect2>
853
854-->
855
856<Sect2><Title>Cavern Commands</Title>
857
858<Para>Commands in <filename>.svx</filename> files are introduced by an asterisk
859(by default - this can be changed using the <command>set</command> command).
860</Para>
861
862<Para>The commands are documented in a common format:
863</Para>
864
865<!-- FIXME: make this a RefGroup (or whatever that's called) of RefEntry-s? -->
866<itemizedlist>
867<listitem><para>Command Name</para></listitem>
868<listitem><para>Syntax</para></listitem>
869<listitem><para>Example</para></listitem>
870<listitem><para>Validity</para></listitem>
871<!-- FIXME
872anywhere, in a block, at start of a block, after a begin (for *end)
873-->
874<listitem><para>Description</para></listitem>
875<listitem><para>Caveats</para></listitem>
876<listitem><para>See Also</para></listitem>
877<!-- FIXME
878"Usefulness" - or status maybe?
879deprecated, esoteric (*set), useful, vital
880-->
881</itemizedlist>
882
883<Sect3><Title>ALIAS</Title>
884
885<VariableList>
886
887<VarListEntry><Term>Syntax</Term>
888
889<listitem><Para>*alias station &lt;alias&gt; [&lt;target&gt;]</Para></listitem>
890
891</VarListEntry>
892
893<VarListEntry><Term>Example</Term>
894
895<listitem>
896<Para>
897<programlisting>
898*begin parsons_nose
899*alias station - ..
9001 2 12.21 073 -12
9012 -  4.33 011 +02
9022 -  1.64 180 +03
9032 3  6.77 098 -04
904*end parsons_nose</programlisting>
905</Para>
906</listitem>
907
908</VarListEntry>
909
910<VarListEntry><Term>Description</Term>
911
912<listitem><Para>*alias allows you to map a station name which appears in
913the survey data to a different name internally.  At present, you can only
914create an alias of '-' to '..', which is intended to support the pocket topo
915style notation of '-' being a splay to an anonymous point on the cave wall.
916And you can unalias '-' with '*alias station -'.
917</Para>
918
919<Para>
920Aliases are scoped by *begin/*end blocks - when a *end is reached, the aliases
921in force at the corresponding begin are restored.
922</Para>
923
924<Para>
925*alias was added in Survex 1.2.7.
926</Para></listitem>
927
928</VarListEntry>
929
930<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
931
932<VarListEntry><Term>See Also</Term>
933
934<listitem><Para>*begin, *end</Para></listitem>
935
936</VarListEntry>
937
938</VariableList>
939
940</Sect3>
941
942<Sect3><Title>BEGIN</Title>
943
944<VariableList>
945
946<VarListEntry><Term>Syntax</Term>
947
948<listitem><Para>*begin [&lt;survey&gt;]</Para></listitem>
949
950</VarListEntry>
951
952<VarListEntry><Term>Example</Term>
953
954<listitem>
955<Para>
956<programlisting>
957*begin littlebit
9581 2 10.23 106 -02
9592 3  1.56 092 +10
960*end littlebit</programlisting>
961
962<programlisting>
963; length of leg across shaft estimated
964*begin
965*sd tape 2 metres
9669 10 6.   031 -07
967*end</programlisting>
968</Para>
969</listitem>
970
971</VarListEntry>
972
973<VarListEntry><Term>Description</Term>
974
975<listitem><Para>*begin stores the current values of the current settings
976such as instrument calibration, data format, and so on.
977These stored values are restored after the corresponding *end.
978If a survey name is given, this is used inside the *begin/*end block,
979and the corresponding *end should have the same survey name.
980*begin/*end blocks may be nested to indefinite depth.
981</Para></listitem>
982
983</VarListEntry>
984
985<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
986
987<VarListEntry><Term>See Also</Term>
988
989<listitem><Para>*end, *prefix</Para></listitem>
990
991</VarListEntry>
992
993</VariableList>
994
995</Sect3>
996
997<Sect3><Title>CALIBRATE</Title>
998
999<VariableList>
1000
1001<VarListEntry><Term>Syntax</Term>
1002
1003<listitem>
1004<Para>*calibrate &lt;quantity list&gt; &lt;zero error&gt; [&lt;scale&gt;]
1005</Para>
1006<Para>*calibrate &lt;quantity list&gt; &lt;zero error&gt; &lt;units&gt; [&lt;scale&gt;]
1007</Para>
1008<Para>*calibrate default
1009</Para>
1010</listitem>
1011
1012</VarListEntry>
1013
1014<VarListEntry><Term>Example</Term>
1015
1016<listitem>
1017<Para>
1018<programlisting>
1019*calibrate tape +0.3
1020</programlisting>
1021</Para>
1022</listitem>
1023
1024</VarListEntry>
1025
1026<VarListEntry><Term>Description</Term>
1027
1028<listitem>
1029
1030<Para>
1031*calibrate is used to specify instrument calibrations.
1032</Para>
1033
1034<Para>
1035&lt;quantity&gt; is one of TAPE|COMPASS|CLINO|COUNTER|DEPTH|DECLINATION|X|Y|Z
1036</Para>
1037
1038<Para>
1039Several quantities can be given in &lt;quantity list&gt;
1040</Para>
1041
1042<Para>
1043You need to be careful about the sign of the ZeroError. The value of
1044ZeroError is what the instrument would read when measuring a
1045reading which should be zero.  So for example, if your tape measure
1046has the end missing, and you are using the 30cm mark to take all
1047measurements from, then a zero distance would be measured as 30cm and
1048you would correct this with:
1049</Para>
1050
1051<programlisting>*CALIBRATE tape +0.3</programlisting>
1052
1053<Para>If you tape was too long, starting at -20cm (it does happen!)
1054then you can correct it with:
1055</Para>
1056
1057<programlisting>*CALIBRATE tape -0.2</programlisting>
1058
1059<Para>Note: ZeroError is irrelevant for Topofil counters and depth
1060gauges since pairs of readings are subtracted.
1061</Para>
1062
1063<Para>
1064In the first form in the synopsis above, the zero error is measured by the
1065instrument itself (e.g. reading off the number where a truncated tape now ends)
1066and any scale factor specified applies to it, like so:
1067</Para>
1068
1069<Para>
1070Value = ( Reading - ZeroError ) * Scale    (Scale defaults to 1.0)
1071</Para>
1072
1073<Para>
1074In the second form above (supported since Survex 1.2.21), the zero error has
1075been measured externally (e.g. measuring how much too long your tape is with
1076a ruler) - the units of the zero error are explicitly specified and any scale
1077factor isn't applied to it:
1078</Para>
1079
1080<Para>
1081Value = ( Reading * Scale ) - ZeroError    (Scale defaults to 1.0)
1082</Para>
1083
1084<Para>
1085If the scale factor is 1.0, then the two forms are equivalent, though they
1086still allow you to diffentiate between how the zero error has been determined.
1087</Para>
1088
1089</Para>
1090The magnetic declination is the difference between true north and magnetic
1091north.  This varies both by location and over time.  You can just use
1092*calibrate compass to correct for any zero error and the declination in one,
1093but it's generally preferable to keep the compass zero error and the magnetic
1094declination separate.
1095</Para>
1096
1097<Para>
1098As of Survex 1.2.21, you can specify the magnetic declination using the
1099*declination command - either by giving an explicit value, or by specifying
1100a location to use along with the survey date to calculate a value from the
1101IGRF model.  In earlier versions, you could only specify the declination
1102using *calibrate declination.
1103</Para>
1104
1105</Para>
1106Cavern calculates the true bearing as follows:
1107</Para>
1108
1109<Para>
1110(magnetic bearing) = ((reading)-(compass zero err)) * (compass
1111scale factor)
1112</Para>
1113
1114<Para>
1115(true bearing) = ((bearing)-(declination zero err))
1116</Para>
1117
1118<Para>
1119The scale factor for DECLINATION must be 1.0, otherwise an error
1120is given.
1121</Para>
1122
1123<Para>
1124Magnetic declinations are conventionally positive when magnetic north is east of
1125true north.  With *declination, you specify the declination with the conventional
1126sign, but with *calibrate declination you need to reverse the sign when
1127specifying the declination correction to use - for example, for an area where
1128the magnetic declination is 5 degrees, you should use:
1129</Para>
1130
1131<programlisting>*CALIBRATE DECLINATION -5</programlisting>
1132
1133<Para>
1134The default is all quantities calibrated to scale factor 1.0,
1135zero error 0.0
1136</Para>
1137
1138</listitem>
1139
1140</VarListEntry>
1141
1142<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1143
1144<VarListEntry><Term>See Also</Term>
1145
1146<listitem><Para>*declination, *units</Para></listitem>
1147
1148</VarListEntry>
1149
1150</VariableList>
1151
1152</Sect3>
1153
1154<Sect3><Title>CASE</Title>
1155
1156<VariableList>
1157
1158<VarListEntry><Term>Syntax</Term>
1159
1160<listitem><para>*case preserve|toupper|tolower</para></listitem>
1161
1162</VarListEntry>
1163
1164<VarListEntry><Term>Example</Term>
1165
1166<listitem>
1167<Para>
1168<programlisting>
1169*begin bobsbit
1170; Bob insists on using case sensitive station names
1171*case preserve
11721 2   10.23 106 -02
11732 2a   1.56 092 +10
11742 2A   3.12 034 +02
11752 3    8.64 239 -01
1176*end bobsbit</programlisting>
1177</Para>
1178</listitem>
1179
1180</VarListEntry>
1181
1182<VarListEntry><Term>Description</Term>
1183
1184<listitem><Para>*case determines how the case of letters in survey names is
1185handled.  By default all names are forced to lower case (which gives a case
1186insensitive match, but you can tell cavern to force to upper case, or leave
1187the case as is (in which case '2a' and '2A' will be regarded as different).
1188</Para></listitem>
1189
1190</VarListEntry>
1191
1192<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1193
1194<!-- <VarListEntry><Term>See Also</Term>
1195
1196<listitem><Para>*end, *prefix</Para></listitem>
1197
1198</VarListEntry>
1199-->
1200
1201</VariableList>
1202
1203<!-- FIXME - work this text in here or elsewhere
1204
1205What I mean (though failed to express very well) is that a dataset without
1206this information isn't the same dataset (in general anyway).  For example:
1207
1208A1 a2 10.32 140 -05
1209a2 a3  4.91 041 -01
1210a1 a3  7.01 206  02
1211
1212is either a traverse of 3 legs or a (probably badly misclosed) loop.  If
1213these names are on the original survey notes, the surveyors ought to say
1214whether "A1" is the same as "a1" (although the usual case for using this
1215feature is probably for importing data from elsewhere).  Similarly for
1216truncation.  Whether a clino of +/-90 degrees (or +/-100 grad, etc) is
1217interpreted as a plumb is something that should have been noted in the cave
1218(unless it's implicit because it's standard practice for a survey project).
1219
1220It's a similar issue to calibration data in many ways.  You can argue it's
1221not part of "the survey", but without it the survey won't be the same shape,
1222and it's not useful to process the same survey with different settings for
1223compass calibration or name case sensitivity.
1224
1225>Clearly that is unhelpfully strict, but it is
1226>important to be semantically clear about what is 'data' and what is 'commands
1227>or meta-data' which describe what to do with/how to interpret that data.
1228
1229Think of the lines starting with a "*" as "command or meta-data".
1230
1231>The most-correct solution to this is (I believe) Martin Heller's idea about
1232>including 'rules' in the datastream, but that's too big a subject for right
1233>now.
1234>
1235>The reason '-C' was made into a command-line option, was that it made very
1236>little sense to change it part way though a dataset. What exactly happens if
1237>you suddenly tell cavern to become case-sensitive halfway through a run?
1238
1239-C has always had 3 settings - "leave case alone", "force to lower", and
1240"force to upper".  It doesn't really mean "case sensitivity" but rather
1241something like "case processing".  So you can usefully change it during a
1242run.  So if my dataset treats "NoTableChamber" (so named because it was
1243lacking in furniture) as different from "NotableChamber" (which was notable
1244for other reasons) I can process it with a dataset from someone else which
1245needs to be treated as case insensitive like so:
1246
1247*begin my_cave
1248*include my_dataset
1249*end my_cave
1250
1251*equate my_cave.NoTableChamber.14 your_cave.linkpassage.13
1252
1253*begin your_cave
1254*case tolower
1255*include your_dataset
1256*end your_cave
1257
1258You may be thinking of -U<n>, which used to mean "only compare the first n
1259characters of station names", but that doesn't allow arbitrary datasets to
1260be processed together.
1261
1262So we changed it to mean "truncate station names to n characters", and
1263allowed it to be changed at any point, rather than being set once for the
1264whole run.
1265
1266-->
1267
1268</Sect3>
1269
1270<Sect3><Title>COPYRIGHT</Title>
1271
1272<VariableList>
1273
1274<VarListEntry><Term>Syntax</Term>
1275
1276<listitem><Para>*copyright &lt;date&gt; &lt;text&gt;</Para></listitem>
1277
1278</VarListEntry>
1279
1280<VarListEntry><Term>Example</Term>
1281
1282<listitem>
1283<Para>
1284<programlisting>
1285*begin littlebit
1286*copyright 1983 CUCC
12871 2 10.23 106 -02
12882 3  1.56 092 +10
1289*end littlebit</programlisting>
1290</Para>
1291</listitem>
1292
1293</VarListEntry>
1294
1295<VarListEntry><Term>Validity</Term>
1296
1297<listitem><Para>valid at the start of a *begin/*end block.
1298</Para></listitem>
1299
1300</VarListEntry>
1301
1302<VarListEntry><Term>Description</Term>
1303
1304<listitem><Para>*copyright allows the copyright information to be
1305stored in a way that can be automatically collated.
1306</Para></listitem>
1307
1308</VarListEntry>
1309
1310<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1311
1312<VarListEntry><Term>See Also</Term>
1313
1314<listitem><Para>*begin</Para></listitem>
1315
1316</VarListEntry>
1317
1318</VariableList>
1319
1320</Sect3>
1321
1322<Sect3><Title>CS</Title>
1323
1324<VariableList>
1325
1326<VarListEntry><Term>Syntax</Term>
1327
1328<listitem><Para>*cs [out] &lt;coordinate system&gt;</Para></listitem>
1329
1330</VarListEntry>
1331
1332<VarListEntry><Term>Example</Term>
1333
1334<listitem>
1335<Para>
1336<programlisting>
1337*cs UTM60S
1338*fix beehive 313800 5427953 20</programlisting>
1339</Para>
1340
1341<Para>
1342<programlisting>
1343; Output in the coordinate system used in the Totes Gebirge in Austria
1344*cs out custom "+proj=tmerc +lat_0=0 +lon_0=13d20 +k=1 +x_0=0 +y_0=-5200000 +ellps=bessel +towgs84=577.326,90.129,463.919,5.137,1.474,5.297,2.4232"</programlisting>
1345</Para>
1346</listitem>
1347
1348</VarListEntry>
1349
1350<VarListEntry><Term>Description</Term>
1351
1352<listitem><Para>*cs allows the coordinate systems used for fixed points and for
1353processed survey data to be specified.
1354</Para>
1355
1356<Para>
1357*cs was added in Survex 1.2.14, but handling of fixed points specified with
1358latitude and longitude didn't work until 1.2.21.  And *fix with standard
1359deviations specified also didn't work until 1.2.21.
1360</Para>
1361
1362<Para>
1363The currently supported coordinate systems are:
1364</Para>
1365
1366<Para>CUSTOM followed by a PROJ4 string (like in the example above).</Para>
1367
1368<Para>EPSG: followed by a positive integer code.  EPSG codes cover most
1369coordinate systems in use, and PROJ supports many of these.  The website
1370<ulink url="http://epsg.io/">http://epsg.io/</ulink> is a useful resource for
1371finding the EPSG code you want.  Supported since Survex 1.2.15.</Para>
1372
1373<Para>ESRI: followed by a positive integer code.  ESRI codes are used by
1374ArcGIS to specify coordinate systems (in a similar way to EPSG codes), and PROJ
1375supports many of them.  Supported since Survex 1.2.15.</Para>
1376
1377<Para>EUR79Z30 for UTM zone 30, EUR79 datum.  Supported since Survex 1.2.15.
1378</Para>
1379
1380<Para>IJTSK for the modified version of the Czechoslovak S-JTSK system where
1381the axes point East and North.  Supported since Survex 1.2.15.</Para>
1382
1383<Para>IJTSK03 for a variant of IJTSK.  Supported since Survex 1.2.15.</Para>
1384
1385<Para>JTSK for the Czechoslovak S-JTSK system.  The axes on this point West
1386and South, so it's not support as an output coordinate system.
1387Supported since Survex 1.2.16.</Para>
1388
1389<Para>JTSK03 for a variant of JTSK.  Supported since Survex 1.2.16.</Para>
1390
1391<Para>LONG-LAT for longitude/latitude.  The WGS84 datum is assumed.  Supported
1392since Survex 1.2.15.</Para>
1393
1394<Para>OSGB: followed by a two letter code for the UK Ordnance Survey National
1395Grid.  The first letter should be 'H', 'N', 'O', 'S' or 'T'; the second any
1396letter except 'I'.  Supported since Survex 1.2.15.</Para>
1397
1398<Para>S-MERC for the "Web Mercator" spherical mercator projection, used by
1399online map sites like OpenStreetMap, Google maps, Bing maps, etc.  Supported
1400since Survex 1.2.15.
1401</Para>
1402
1403<Para>UTM followed by a zone number (1-60), optionally followed by "N" or "S"
1404(default is North).  The WGS84 datum is assumed.</Para>
1405
1406<Para>
1407By default, Survex works in an unspecified coordinate system (and this was the
1408only option before *cs was added).  However, it's useful for coordinate system
1409which the processed survey data is in to be specified if you want to use the
1410processed data in ways which required knowing the coordinate system (such as
1411exporting a list of entrances for use in a GPS).  You can now do this by using
1412"*cs out".
1413</Para>
1414
1415<Para>
1416It is also useful to be able to take coordinates for fixed points in whatever
1417coordinate system you receive them in and put them directly into Survex, rather
1418than having to convert with an external tool.  For example, you may have your
1419GPS set to show coordinates in UTM with the WGS84 datum, even though you want
1420the processed data to be in some local coordinate system.  And someone else
1421may provide GPS coordinates in yet another coordinate system.  You just need
1422to set the appropriate coordinate system with "*cs" before each group of "*fix"
1423commands in a particular coordinate system.
1424</Para>
1425
1426<Para>
1427If you're going to make use of "*cs", then the coordinate system must be
1428specified for everything, so a coordinate system must be in effect for all
1429"*fix" commands, and you must set the output coordinate system before any
1430points are fixed.
1431</Para>
1432
1433<Para>
1434Also, if "*cs" is in use, then you can't omit the coordinates in a "*fix"
1435command, and a fixed point won't be invented if none exists.
1436</Para>
1437
1438<Para>
1439If you use "*cs out" more than once, the second and subsequent commands are
1440silently ignored - this makes it possible to combine two datasets with
1441different "*cs out" settings without having to modify either of them.
1442</Para>
1443
1444<Para>
1445Something to be aware of with "*cs" is that altitudes are currently assumed to
1446be "height above the ellipsoid", whereas GPS units typically give you "height
1447above sea level", or more accurately "height above a particular geoid".  This
1448is something we're looking at how best to address, but you shouldn't need to
1449worry about it if your fixed points are in the same coordinate system as your
1450output, or if they all use the same ellipsoid.  For a more detailed discussion
1451of this, please see: http://expo.survex.com/handbook/survey/coord.htm
1452</Para>
1453</listitem>
1454
1455</VarListEntry>
1456
1457<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1458
1459<VarListEntry><Term>See Also</Term>
1460
1461<listitem><Para>*fix</Para></listitem>
1462
1463</VarListEntry>
1464
1465</VariableList>
1466
1467</Sect3>
1468<Sect3><Title>DATA</Title>
1469
1470<VariableList>
1471
1472<VarListEntry><Term>Syntax</Term>
1473
1474<listitem><Para>*data &lt;style&gt; &lt;ordering&gt;</Para></listitem>
1475<!-- BACKCOMPASS BACKCLINO -->
1476</VarListEntry>
1477
1478<VarListEntry><Term>Example</Term>
1479
1480<listitem>
1481<Para>
1482<programlisting>
1483*data normal from to compass tape clino</programlisting>
1484</Para>
1485
1486<Para>
1487<programlisting>
1488*data normal station ignoreall newline compass tape clino</programlisting>
1489</Para>
1490</listitem>
1491
1492</VarListEntry>
1493
1494<VarListEntry><Term>Description</Term>
1495
1496<listitem><Para>
1497&lt;style&gt; = DEFAULT|NORMAL|DIVING|CARTESIAN|TOPOFIL|CYLPOLAR|NOSURVEY|PASSAGE
1498</Para>
1499
1500<Para>
1501&lt;ordering&gt; = ordered list of instruments - which are valid depends on the
1502style.
1503</Para>
1504
1505<Para>
1506In Survex 1.0.2 and later, TOPOFIL is simply a synonym for NORMAL, left in to
1507allow older data to be processed without modification.  Use the name NORMAL
1508by preference.
1509</Para>
1510
1511<Para>
1512There are two variants of each style - interleaved and non-interleaved.
1513Non-interleaved is "one line per leg", interleaved has a line for the data
1514shared between two legs (e.g. STATION=FROM/TO, DEPTH=FROMDEPTH/TODEPTH,
1515COUNT=FROMCOUNT/TOCOUNT).  Note that not all interleavable readings have to
1516be interleaved - for example:
1517
1518<programlisting>
1519*data diving station newline fromdepth compass tape todepth</programlisting>
1520
1521In addition, interleaved data can have a DIRECTION reading, which can be "F"
1522for a foresight or "B" for a backsight.
1523</Para>
1524
1525<Para>
1526In NORMAL, DIVING, and CYLPOLAR data styles, TAPE may be replaced by
1527FROMCOUNT/TOCOUNT (or COUNT in interleaved data) to allow processing of surveys
1528performed with a Topofil instead of a tape.
1529</Para>
1530
1531<VariableList>
1532
1533<VarListEntry><Term>DEFAULT</Term>
1534<listitem><Para>Select the default data style and ordering (NORMAL style, ordering: from to tape compass clino).</Para></listitem>
1535</VarListEntry>
1536
1537<VarListEntry><Term>NORMAL</Term>
1538<listitem><Para>The usual tape/compass/clino centreline survey.
1539For non-interleaved data the allowed readings are:
1540FROM TO TAPE COMPASS CLINO BACKCOMPASS BACKCLINO;
1541for interleaved data the allowed readings are:
1542STATION DIRECTION TAPE COMPASS CLINO BACKCOMPASS BACKCLINO.
1543The CLINO/BACKCLINO reading is not required - if it's not given, the vertical
1544standard deviation is taken to be proportional to the tape measurement.
1545Alternatively, individual clino readings can be given as OMIT (default "-")
1546which allows for data where only some clino readings are missing.
1547E.g.:
1548
1549<programlisting>
1550*data normal from to compass clino tape
15511 2 172 -03 12.61</programlisting>
1552
1553<programlisting>
1554*data normal station newline direction tape compass clino
15551
1556 F 12.61 172 -03
15572</programlisting>
1558
1559<programlisting>
1560*data normal from to compass clino fromcount tocount
15611 2 172 -03 11532 11873</programlisting>
1562
1563<programlisting>
1564*data normal station count newline direction compass clino
15651 11532
1566 F 172 -03
15672 11873</programlisting>
1568 
1569</Para></listitem>
1570</VarListEntry>
1571
1572<VarListEntry><Term>DIVING</Term>
1573<listitem><Para>
1574An underwater survey where the vertical information is from a diver's depth
1575gauge.  This style can also be also used for an above-water survey where the
1576altitude is measured with an altimeter.  DEPTH is defined as the altitude (Z)
1577so increases upwards by default.  So for a diver's depth gauge, you'll need to
1578use *CALIBRATE with a negative scale factor (e.g. *calibrate depth 0 -1).
1579</Para>
1580
1581<Para>For non-interleaved data the allowed readings are:
1582FROM TO TAPE COMPASS CLINO BACKCOMPASS BACKCLINO FROMDEPTH TODEPTH DEPTHCHANGE (the vertical
1583can be given as readings at each station, (FROMDEPTH/TODEPTH) or as a change
1584along the leg (DEPTHCHANGE)).</Para>
1585
1586<Para>Survex 1.2.20 and later allow an optional CLINO and/or BACKCLINO reading
1587in DIVING style.  At present these extra readings are checked for syntactic
1588validity, but are otherwise ignored.  The intention is that a future version
1589will check them against the other readings to flag up likely blunders, and
1590average with the slope data from the depth gauge and tape reading.</Para>
1591
1592<Para>For interleaved data the allowed readings are:
1593STATION DIRECTION TAPE COMPASS BACKCOMPASS DEPTH DEPTHCHANGE.
1594(the vertical change can be given as a reading at the station (DEPTH) or as a change along the leg (DEPTHCHANGE)).
1595
1596<programlisting>
1597*data diving from to tape compass fromdepth todepth
15981 2 14.7 250 -20.7 -22.4</programlisting>
1599
1600<programlisting>
1601*data diving station depth newline tape compass
16021 -20.7
1603 14.7 250
16042 -22.4</programlisting>
1605
1606<programlisting>
1607*data diving from to tape compass depthchange
16081 2 14.7 250 -1.7</programlisting>
1609</Para>
1610</listitem>
1611</VarListEntry>
1612
1613<VarListEntry><Term>CARTESIAN</Term>
1614<listitem><Para>
1615Cartesian data style allows you to specify the (x,y,z) changes between
1616stations.  It's useful for digitising surveys where the original survey
1617data has been lost and all that's available is a drawn up version.
1618
1619<programlisting>
1620*data cartesian from to northing easting altitude
16211 2 16.1 20.4 8.7</programlisting>
1622
1623<programlisting>
1624*data cartesian station newline northing easting altitude
16251
1626 16.1 20.4 8.7
16272</programlisting>
1628
1629<!--FIXME: dx dy dz-->
1630</Para>
1631
1632<Note><Para>
1633Cartesian data are relative to <emphasis>true</emphasis> North not
1634<emphasis>magnetic</emphasis> North (i.e. they are unaffected by
1635<command>*calibrate declination</command>).
1636</Para></Note>
1637</listitem>
1638</VarListEntry>
1639
1640<VarListEntry><Term>CYLPOLAR</Term>
1641<listitem><Para>
1642A CYLPOLAR style survey is very similar to a diving survey, except that the tape
1643is always measured horizontally rather than along the slope of the leg.
1644
1645<programlisting>
1646*data cypolar from to tape compass fromdepth todepth
16471 2 9.45 311 -13.3 -19.0</programlisting>
1648
1649<programlisting>
1650*data cylpolar station depth newline tape compass
16511 -13.3
1652 9.45 311
16532 -19.0</programlisting>
1654
1655<programlisting>
1656*data cylpolar from to tape compass depthchange
16571 2 9.45 311 -5.7</programlisting>
1658</Para></listitem>
1659</VarListEntry>
1660
1661<VarListEntry><Term>NOSURVEY</Term>
1662<listitem><Para>
1663A NOSURVEY survey doesn't have any measurements - it merely indicates that
1664there is line of sight between the pairs of stations.
1665
1666<programlisting>
1667*data nosurvey from to
16681 7
16695 7
16709 11</programlisting>
1671
1672<programlisting>
1673*data nosurvey station
16741
16757
16765
1677
1678*data nosurvey station
16799
168011</programlisting>
1681</Para></listitem>
1682</VarListEntry>
1683
1684<VarListEntry><Term>PASSAGE</Term>
1685<listitem><Para>
1686This survey style defines a 3D "tube" modelling a passage in the cave.
1687The tube uses the survey stations listed in the order listed.  It's
1688permitted to use survey stations which aren't directly linked by
1689the centre-line survey.  This can be useful - sometimes the centreline
1690will step sideways or up/down to allow a better sight for the next
1691leg and you can ignore the extra station.  You can also define tubes
1692along unsurveyed passages, akin to "nosurvey" legs in the centreline
1693data.</Para>
1694
1695<Para>This means that you need to split off side passages into seperate
1696tubes, and hence separate sections of passage data, starting with
1697a new *data command.</Para>
1698
1699<Para>
1700Simple example of how to use this data style (note the use of ignoreall
1701to allow a free-form text description to be given):
1702
1703<programlisting>
1704*data passage station left right up down ignoreall
17051  0.1 2.3 8.0 1.4  Sticking out point on left wall
17062  0.0 1.9 9.0 0.5  Point on left wall
17073  1.0 0.7 9.0 0.8  Highest point of boulder
1708</programlisting>
1709</Para>
1710</listitem>
1711</VarListEntry>
1712</VariableList>
1713
1714<Para>
1715IGNORE skips a field (it may be used any number of times),
1716and IGNOREALL may be used last to ignore the rest of the data line.
1717</Para>
1718
1719<Para>
1720LENGTH is a synonym for TAPE; BEARING for COMPASS; GRADIENT for CLINO; COUNT for COUNTER.<!--FIXME : others?-->
1721</Para>
1722
1723<Para>
1724The units of each quantity may be set with the UNITS command.
1725</Para>
1726
1727<!-- FIXME: plumbed diving legs -->
1728
1729<!--FIXME:
1730<Para>
1731Uses for CYLPOLAR:
1732Perhaps a Grade 3 survey, or when surveying with a level and stick (?)
1733[note - UBSS use it for the old County Clare data]
1734</Para>
1735-->
1736
1737</listitem>
1738
1739</VarListEntry>
1740
1741</VariableList>
1742
1743</Sect3>
1744
1745<Sect3><Title>DATE</Title>
1746<VariableList>
1747
1748<VarListEntry><Term>Syntax</Term>
1749
1750<listitem><Para>*date &lt;year&gt;[.&lt;month&gt;[.&lt;day&gt;]][-&lt;year&gt;[.&lt;month&gt;[.&lt;day&gt;]]]</Para></listitem>
1751
1752</VarListEntry>
1753
1754<VarListEntry><Term>Example</Term>
1755
1756<listitem>
1757<Para>
1758<programlisting>
1759*date 2001</programlisting>
1760
1761<programlisting>
1762*date 2000.10</programlisting>
1763
1764<programlisting>
1765*date 1987.07.27</programlisting>
1766
1767<programlisting>
1768*date 1985.08.12-1985.08.13</programlisting>
1769</Para>
1770</listitem>
1771
1772</VarListEntry>
1773
1774<VarListEntry><Term>Validity</Term>
1775
1776<listitem><Para>valid at the start of a *begin/*end block.
1777</Para></listitem>
1778
1779</VarListEntry>
1780
1781<VarListEntry><Term>Description</Term>
1782
1783<listitem><Para>
1784*date specifies the date that the survey was done.  A range of dates
1785can be specified (useful for overnight or multi-day surveying trips).
1786</Para></listitem>
1787
1788</VarListEntry>
1789
1790<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1791
1792<VarListEntry><Term>See Also</Term>
1793
1794<listitem><Para>*begin, *instrument, *team</Para></listitem>
1795
1796</VarListEntry>
1797
1798</VariableList>
1799
1800</Sect3>
1801
1802<Sect3><Title>DECLINATION</Title>
1803
1804<VariableList>
1805
1806<VarListEntry><Term>Syntax</Term>
1807
1808<listitem>
1809<Para>*declination &lt;declination&gt; &lt;units&gt;</Para>
1810<Para>*declination &lt;auto&gt; &lt;x&gt; &lt;y&gt; &lt;z&gt;</Para>
1811</listitem>
1812
1813</VarListEntry>
1814
1815<VarListEntry><Term>Description</Term>
1816
1817<Para>
1818This command allows the magnetic declination to be specified.  This is added to
1819compass readings to give bearings relative to true North.
1820</Para>
1821
1822<Para>
1823The first form above specifies an explicit value for the magnetic declination,
1824while the second tells cavern to use the IGRF (International Geomagnetic
1825Reference Field) model to calculate a value for the declination at the
1826specified coordinates on the date of each survey.  The coordinates are
1827interpreted as being in the current coordinate system (as set with *cs).
1828</Para>
1829
1830<Para>
1831This command was added in Survex 1.2.21 - in earlier versions you can set a
1832fixed declination value using <programlisting>*calibrate declination
1833&lt;value&gt;</programlisting> (but note that &lt;value&gt; needs to have the
1834opposite sign to that conventionally used for the declination, while this
1835command take the declination with the conventional sign.
1836</Para>
1837
1838</VarListEntry>
1839
1840<VarListEntry><Term>See Also</Term>
1841
1842<listitem><Para>*calibrate</Para></listitem>
1843
1844</VarListEntry>
1845
1846</VariableList>
1847
1848</Sect3>
1849
1850<Sect3><Title>DEFAULT</Title>
1851
1852<VariableList>
1853
1854<VarListEntry><Term>Syntax</Term>
1855
1856<listitem><Para>*default &lt;settings list&gt;|all</Para></listitem>
1857
1858</VarListEntry>
1859
1860<VarListEntry><Term>Description</Term>
1861
1862<listitem><Para>
1863The valid settings are CALIBRATE, DATA, and UNITS.
1864</Para>
1865
1866<Para>
1867*default restores defaults for given settings.  This command is deprecated -
1868you should instead use: *calibrate default, *data default, *units default.
1869</Para></listitem>
1870
1871</VarListEntry>
1872
1873<VarListEntry><Term>See Also</Term>
1874
1875<listitem><Para>*calibrate, *data, *units</Para></listitem>
1876
1877</VarListEntry>
1878
1879</VariableList>
1880
1881</Sect3>
1882
1883<Sect3><Title>END</Title>
1884
1885<VariableList>
1886
1887<VarListEntry><Term>Syntax</Term>
1888
1889<listitem><Para>*end [&lt;survey&gt;]</Para></listitem>
1890
1891</VarListEntry>
1892
1893<VarListEntry><Term>Validity</Term>
1894
1895<listitem><Para>valid for closing a block started by *begin in the same file.
1896</Para></listitem>
1897
1898</VarListEntry>
1899
1900<VarListEntry><Term>Description</Term>
1901
1902<listitem><Para>
1903Closes a block started by *begin.
1904</Para></listitem>
1905
1906</VarListEntry>
1907
1908<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1909
1910<VarListEntry><Term>See Also</Term>
1911
1912<listitem><Para>*begin</Para></listitem>
1913
1914</VarListEntry>
1915
1916</VariableList>
1917
1918</Sect3>
1919
1920<Sect3><Title>ENTRANCE</Title>
1921
1922<VariableList>
1923
1924<VarListEntry><Term>Syntax</Term>
1925
1926<listitem><Para>*entrance &lt;station&gt;</Para></listitem>
1927
1928</VarListEntry>
1929
1930<VarListEntry><Term>Example</Term>
1931
1932<listitem>
1933<Para>
1934<programlisting>
1935*entrance P163</programlisting>
1936</Para>
1937</listitem>
1938
1939</VarListEntry>
1940
1941<VarListEntry><Term>Description</Term>
1942
1943<listitem><Para>
1944*entrance sets the <emphasis>entrance</emphasis> flag for a station.
1945This information is used by aven to allow entrances to be highlighted.
1946</Para>
1947
1948<!-- FIXME:
1949(could be inferred from surface/ug join, but better to specify because
1950of caves with no surf svy (or no underground survey)
1951and also situations in which multiple surveys leave through an entrance)
1952-->
1953</listitem>
1954
1955</VarListEntry>
1956
1957<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
1958
1959<!-- <VarListEntry><Term>See Also</Term>
1960
1961<listitem><Para></Para></listitem>
1962
1963</VarListEntry>
1964-->
1965
1966</VariableList>
1967
1968</Sect3>
1969
1970<Sect3><Title>EQUATE</Title>
1971
1972<VariableList>
1973
1974<VarListEntry><Term>Syntax</Term>
1975
1976<listitem><Para>*equate &lt;station&gt; &lt;station&gt;...</Para></listitem>
1977
1978</VarListEntry>
1979
1980<VarListEntry><Term>Example</Term>
1981
1982<listitem>
1983<Para>
1984<programlisting>
1985*equate chosspot.1 triassic.27</programlisting>
1986</Para>
1987</listitem>
1988
1989</VarListEntry>
1990
1991<VarListEntry><Term>Description</Term>
1992
1993<listitem><Para>
1994*equate specifies that the station names in the list refer to the
1995same physical survey station. An error is given if there is only one station
1996listed.
1997</Para>
1998
1999<!-- FIXME:
2000<Para>
2001I think this is preferable to using:
2002</Para>
2003
2004<programlisting> a b 0.00   0   0</programlisting>
2005
2006<Para>
2007as EQUATE does not add in an extra position error. It is also clearer than
2008substituting in the original name wherever passages are linked. If you
2009disagree, you can always use one of the other methods!
2010</Para>
2011-->
2012</listitem>
2013
2014</VarListEntry>
2015
2016<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2017
2018<VarListEntry><Term>See Also</Term>
2019
2020<listitem><Para>*infer equates</Para></listitem>
2021
2022</VarListEntry>
2023
2024</VariableList>
2025
2026</Sect3>
2027
2028<Sect3><Title>EXPORT</Title>
2029
2030<VariableList>
2031
2032<VarListEntry><Term>Syntax</Term>
2033
2034<listitem><Para>*export &lt;station&gt;...</Para></listitem>
2035
2036</VarListEntry>
2037
2038<VarListEntry><Term>Example</Term>
2039
2040<!-- FIXME better example -->
2041<listitem>
2042<Para>
2043<programlisting>
2044*export 1 6 17</programlisting>
2045</Para>
2046</listitem>
2047
2048</VarListEntry>
2049
2050<VarListEntry><Term>Validity</Term>
2051
2052<listitem><Para>valid at the start of a *begin/*end block.
2053</Para></listitem>
2054
2055</VarListEntry>
2056
2057<VarListEntry><Term>Description</Term>
2058
2059<listitem><Para>
2060*export marks the stations named as referable to from the enclosing
2061survey.  To be able to refer to a station from a survey several levels
2062above, it must be exported from each enclosing survey.
2063</Para>
2064
2065<!-- FIXME:
2066<Para>
2067I think this is preferable to using:
2068</Para>
2069
2070<programlisting> a b 0.00   0   0</programlisting>
2071
2072<Para>
2073as EQUATE does not add in an extra position error. It is also clearer than
2074substituting in the original name wherever passages are linked. If you
2075disagree, you can always use one of the other methods!
2076</Para>
2077-->
2078</listitem>
2079
2080</VarListEntry>
2081
2082<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2083
2084<VarListEntry><Term>See Also</Term>
2085
2086<listitem><Para>*begin, *infer exports</Para></listitem>
2087
2088</VarListEntry>
2089
2090</VariableList>
2091
2092</Sect3>
2093
2094<Sect3><Title>FIX</Title>
2095
2096<VariableList>
2097
2098<VarListEntry><Term>Syntax</Term>
2099
2100<listitem><Para>*fix &lt;station&gt; [reference]
2101 [ &lt;x&gt; &lt;y&gt; &lt;z&gt;
2102   [ &lt;x std err&gt; &lt;y std err&gt; &lt;z std err&gt;
2103     [ &lt;cov(x,y)&gt; &lt;cov(y,z)&gt; &lt;cov(z,x)&gt; ] ] ]
2104</Para></listitem>
2105
2106</VarListEntry>
2107
2108<VarListEntry><Term>Example</Term>
2109
2110<listitem>
2111<Para>
2112<programlisting>
2113*fix entrance.0 32768 86723 1760</programlisting>
2114
2115<programlisting>
2116*fix KT114_96 reference 36670.37 83317.43 1903.97</programlisting>
2117</Para>
2118</listitem>
2119
2120</VarListEntry>
2121
2122<VarListEntry><Term>Description</Term>
2123
2124<listitem>
2125<Para>
2126*fix fixes the position of &lt;station&gt; at the given coordinates.
2127If you haven't specified the coordinate system with "*cs", you can
2128omit the position and it will default to (0,0,0).  The standard errors default
2129to zero (fix station exactly).  cavern will give an error if you attempt to fix
2130the same survey station twice at different coordinates, or a warning if you fix
2131it twice with matching coordinates.
2132</Para>
2133
2134<Para>
2135You can also specify just one standard error (in which case it is assumed
2136equal in X, Y, and Z) or two (in which case the first is taken as the
2137standard error in X and Y, and the second as the standard error in Z).
2138</Para>
2139
2140<Para>
2141If you have covariances for the fix, you can also specify these - the
2142order is cov(x,y) cov(y,z) cov(z,x).
2143</Para>
2144
2145<Para>
2146You can fix as many stations as you like - just use a *fix command for each
2147one.  Cavern will check that all stations are connected to
2148at least one fixed point so that co-ordinates can be calculated for all
2149stations.
2150</Para>
2151
2152<Para>
2153By default cavern will warn about stations which have been FIX-ed but
2154not used otherwise.  This is unhelpful if you want to include a
2155standard file of benchmarks, some of which won't be used.
2156In this sort of situation, specify "REFERENCE" after the station name
2157in the FIX command to suppress this warning for a particular station.
2158</Para>
2159
2160<Note><Para>
2161X is Easting, Y is Northing, and Z is altitude.  This convention was chosen
2162since on a map, the horizontal (X) axis is usually East, and the vertical
2163axis (Y) North.  The choice of altitude (rather than depth) for Z is taken
2164from surface maps, and makes for less confusion when dealing with cave
2165systems with more than one entrance.  It also gives a right-handed
2166set of axes.
2167</Para></Note>
2168
2169</listitem>
2170</VarListEntry>
2171
2172<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2173
2174<!-- <VarListEntry><Term>See Also</Term>
2175
2176<listitem><Para></Para></listitem>
2177
2178</VarListEntry>
2179-->
2180
2181</VariableList>
2182
2183</Sect3>
2184
2185<!--
2186<Sect3><Title></Title>
2187
2188<VariableList>
2189
2190<VarListEntry><Term>Syntax</Term>
2191
2192<listitem><Para>*</Para></listitem>
2193
2194</VarListEntry>
2195
2196<VarListEntry><Term>Example</Term>
2197
2198<listitem>
2199<Para>
2200<programlisting>
2201*</programlisting>
2202</Para>
2203</listitem>
2204
2205</VarListEntry>
2206
2207<VarListEntry><Term>Description</Term>
2208
2209<listitem><Para>
2210</Para></listitem>
2211
2212</VarListEntry>
2213
2214<VarListEntry><Term>Caveats </Term> </VarListEntry>
2215
2216<VarListEntry><Term>See Also</Term>
2217
2218<listitem><Para></Para></listitem>
2219
2220</VarListEntry>
2221
2222</VariableList>
2223
2224</Sect3>
2225-->
2226
2227<Sect3><Title>FLAGS</Title>
2228
2229<VariableList>
2230
2231<VarListEntry><Term>Syntax</Term>
2232
2233<listitem><Para>*flags &lt;flags&gt;</Para></listitem>
2234
2235</VarListEntry>
2236
2237<VarListEntry><Term>Example</Term>
2238
2239<listitem>
2240<Para>
2241<programlisting>
2242*flags duplicate not surface</programlisting>
2243</Para>
2244</listitem>
2245
2246</VarListEntry>
2247
2248<VarListEntry><Term>Description</Term>
2249
2250<listitem><Para>
2251*flags updates the current flag settings.
2252Flags not mentioned retain their previous state.  Valid flags
2253are DUPLICATE, SPLAY, and SURFACE, and a flag may be preceded with NOT to
2254turn it off.
2255</Para>
2256
2257<Para>
2258Survey legs marked SURFACE are hidden from plots by default, and not
2259included in cave survey length calculations.  Survey legs marked as
2260DUPLICATE or SPLAY are also not included in cave survey length
2261calculations; legs marked SPLAY are ignored by the extend program.
2262DUPLICATE is intended for the case when if you have two different
2263surveys along the same section of passage (for example to tie two
2264surveys into a permanent survey station); SPLAY is intended for
2265cases such as radial legs in a large chamber.
2266</Para>
2267</listitem>
2268
2269</VarListEntry>
2270
2271<VarListEntry><Term>See Also</Term>
2272
2273<listitem><Para>*begin</Para></listitem>
2274
2275</VarListEntry>
2276
2277</VariableList>
2278
2279</Sect3>
2280
2281<Sect3><Title>INCLUDE</Title>
2282
2283<VariableList>
2284
2285<VarListEntry><Term>Syntax</Term>
2286
2287<listitem><Para>*include &lt;filename&gt;</Para></listitem>
2288
2289</VarListEntry>
2290
2291<VarListEntry><Term>Example</Term>
2292
2293<listitem>
2294<Para>
2295<programlisting>
2296*include mission</programlisting>
2297
2298<programlisting>
2299*include "the pits"</programlisting>
2300</Para>
2301</listitem>
2302
2303</VarListEntry>
2304
2305<VarListEntry><Term>Description</Term>
2306
2307<listitem><Para>
2308*include processes &lt;filename&gt; as if it were inserted at this
2309place in the current file. (i.e. The current settings are carried
2310into &lt;filename&gt;, and any alterations to settings in &lt;filename&gt;
2311will be carried back again).  There's one exception to this (for
2312obscure historical reasons) which is that the survey prefix is
2313restored upon return to the original file.  Since *begin and *end
2314nesting cannot cross files, this can only make a difference if you
2315use the deprecated *prefix command.
2316</Para>
2317
2318<Para>If &lt;filename&gt; contains spaces, it must be enclosed in quotes.
2319</Para>
2320
2321<Para>An included file which does not have a complete path
2322is resolved relative to the directory which the parent file is in
2323(just as relative HTML links do).  Cavern will try adding a <filename>.svx</filename>
2324extension, and will also try translating "\" to "/".
2325And as a last
2326resort, it will try a lower case version of the filename (so if you
2327use Unix and someone sends you a DOS/Windows dataset with mismatched
2328case, unzip it with "unzip -L" and UNIX cavern will process it).
2329</Para>
2330
2331<Para>
2332The depth to which you can nest
2333include files may be limited by the operating system
2334you use.  Usually the limit is fairly high (>30), but if you want to be able to
2335process your dataset with <Application>Survex</Application> on any supported platform, it
2336would be prudent not to go overboard with nested include files.
2337</Para>
2338</listitem>
2339</VarListEntry>
2340
2341</VariableList>
2342
2343</Sect3>
2344
2345<Sect3><Title>INFER</Title>
2346
2347<VariableList>
2348
2349<VarListEntry><Term>Syntax</Term>
2350
2351<listitem>
2352<Para>*infer plumbs on|off</Para>
2353
2354<Para>*infer equates on|off</Para>
2355
2356<Para>*infer exports on|off</Para>
2357</listitem>
2358
2359</VarListEntry>
2360
2361<!--
2362<VarListEntry><Term>Example</Term>
2363
2364<listitem>
2365<programlisting>
2366</programlisting>
2367
2368</listitem>
2369
2370</VarListEntry>
2371-->
2372
2373<VarListEntry><Term>Description</Term>
2374
2375<listitem>
2376<Para>"*infer plumbs on" tells cavern to interpret gradients of +/- 90
2377degrees as UP/DOWN (so it
2378will not apply the clino correction to them). This is useful when
2379the data has not been converted to have UP and DOWN in it.
2380</Para>
2381
2382<para>"*infer equates on" tells cavern to interpret a leg with
2383a tape reading of zero as a *equate.  this prevents tape corrections
2384being applied to them.
2385</para>
2386
2387<para>"*infer exports on" is necessary when you have a dataset which is
2388partly annotated with *export.  It tells cavern not to complain about
2389missing *export commands in part of the dataset.  Also stations which
2390were used to join surveys are marked as exported in the 3d file.
2391</para>
2392</listitem>
2393
2394</VarListEntry>
2395
2396<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2397
2398<!--
2399<VarListEntry><Term>See Also</Term>
2400
2401<listitem><Para>*end, *prefix</Para></listitem>
2402
2403</VarListEntry>
2404-->
2405
2406</VariableList>
2407
2408</Sect3>
2409
2410<Sect3><Title>INSTRUMENT</Title>
2411
2412<VariableList>
2413
2414<VarListEntry><Term>Syntax</Term>
2415
2416<listitem><Para>*instrument &lt;instrument&gt; &lt;identifier&gt;</Para></listitem>
2417
2418</VarListEntry>
2419
2420<VarListEntry><Term>Example</Term>
2421
2422<listitem>
2423<Para>
2424<programlisting>
2425*instrument compass "CUCC 2"
2426*instrument clino "CUCC 2"
2427*instrument tape "CUCC Fisco Ranger open reel"</programlisting>
2428</Para>
2429</listitem>
2430
2431</VarListEntry>
2432
2433<VarListEntry><Term>Validity</Term>
2434
2435<listitem><Para>valid at the start of a *begin/*end block.
2436</Para></listitem>
2437
2438</VarListEntry>
2439
2440<VarListEntry><Term>Description</Term>
2441
2442<listitem><Para>
2443*instrument specifies the particular instruments used to perform a
2444survey.
2445</Para></listitem>
2446
2447</VarListEntry>
2448
2449<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2450
2451<VarListEntry><Term>See Also</Term>
2452
2453<listitem><Para>*begin, *date, *team</Para></listitem>
2454
2455</VarListEntry>
2456
2457</VariableList>
2458
2459</Sect3>
2460
2461<Sect3><Title>PREFIX</Title>
2462
2463<VariableList>
2464
2465<VarListEntry><Term>Syntax</Term>
2466
2467<listitem><Para>*prefix &lt;survey&gt;</Para></listitem>
2468
2469</VarListEntry>
2470
2471<VarListEntry><Term>Example</Term>
2472
2473<listitem>
2474<Para>
2475<programlisting>
2476*prefix flapjack</programlisting>
2477</Para>
2478</listitem>
2479
2480</VarListEntry>
2481
2482<VarListEntry><Term>Description</Term>
2483
2484<listitem><Para>
2485*prefix sets the current survey.
2486</Para></listitem>
2487
2488</VarListEntry>
2489
2490<VarListEntry><Term>Caveats </Term>
2491
2492<listitem><Para>*prefix is deprecated - you should use *begin and *end
2493instead.</Para></listitem>
2494
2495</VarListEntry>
2496
2497<VarListEntry><Term>See Also</Term>
2498
2499<listitem><Para>*begin, *end</Para></listitem>
2500
2501</VarListEntry>
2502
2503</VariableList>
2504
2505</Sect3>
2506
2507<Sect3><Title>REQUIRE</Title>
2508
2509<VariableList>
2510
2511<VarListEntry><Term>Syntax</Term>
2512
2513<listitem><Para>*require &lt;version&gt;</Para></listitem>
2514
2515</VarListEntry>
2516
2517<VarListEntry><Term>Example</Term>
2518
2519<listitem>
2520<Para>
2521<programlisting>
2522*require 0.98</programlisting>
2523</Para>
2524</listitem>
2525
2526</VarListEntry>
2527
2528<VarListEntry><Term>Description</Term>
2529
2530<listitem><Para>
2531*require checks that the version of cavern in use is at least
2532&lt;version&gt; and stops with an error if not.
2533So if your dataset requires a feature
2534introduced in a particular version, you can add a *require command and
2535users will know what version they need to upgrade to, rather than
2536getting an error message and having to guess what the real problem is.
2537</Para></listitem>
2538
2539</VarListEntry>
2540
2541</VariableList>
2542
2543</Sect3>
2544
2545<Sect3><Title>SD</Title>
2546
2547<VariableList>
2548
2549<VarListEntry><Term>Syntax</Term>
2550
2551<listitem><Para>*sd &lt;quantity list&gt; &lt;standard deviation&gt;
2552</Para></listitem>
2553
2554</VarListEntry>
2555
2556<VarListEntry><Term>Example</Term>
2557
2558<listitem>
2559<Para>
2560<programlisting>
2561*sd tape 0.15 metres</programlisting>
2562</Para>
2563</listitem>
2564
2565</VarListEntry>
2566
2567<VarListEntry><Term>Description</Term>
2568
2569<listitem><Para>
2570*sd sets the standard deviation of a measurement.
2571</Para>
2572
2573<Para>
2574&lt;quantity&gt; is one of (each group gives alternative names for the same
2575quantity):
2576</Para>
2577
2578<ItemizedList>
2579    <listitem><para>TAPE, LENGTH</para></listitem>
2580    <listitem><para>COMPASS, BEARING</para></listitem>
2581    <listitem><para>BACKCOMPASS, BACKBEARING</para></listitem>
2582    <listitem><para>CLINO, GRADIENT</para></listitem>
2583    <listitem><para>BACKCLINO, BACKGRADIENT</para></listitem>
2584    <listitem><para>COUNTER, COUNT</para></listitem>
2585    <listitem><para>DEPTH</para></listitem>
2586    <listitem><para>DECLINATION</para></listitem>
2587    <listitem><para>DX, EASTING</para></listitem>
2588    <listitem><para>DY, NORTHING</para></listitem>
2589    <listitem><para>DZ, ALTITUDE</para></listitem>
2590    <listitem><para>LEFT</para></listitem>
2591    <listitem><para>RIGHT</para></listitem>
2592    <listitem><para>UP, CEILING</para></listitem>
2593    <listitem><para>DOWN, FLOOR</para></listitem>
2594    <listitem><para>LEVEL</para></listitem>
2595    <listitem><para>PLUMB</para></listitem>
2596    <listitem><para>POSITION</para></listitem>
2597</ItemizedList>
2598
2599<Para>
2600&lt;standard deviation&gt; must include units and thus is typically
2601"0.05 metres", or "0.02 degrees". See *units below for full list
2602of valid units.
2603</Para>
2604
2605<!-- FIXME mention central limit theorem -->
2606<Para>
2607To utilise this command fully you need to understand what a
2608<emphasis>standard deviation</emphasis> is.
2609It gives a value to the 'spread' of the errors
2610in a measurement. Assuming that these are normally distributed
2611we can say that 95.44% of the actual lengths will fall within two
2612standard deviations of the measured length. i.e. a tape SD of
26130.25 metres means that the actual length of a tape measurement
2614is within + or - 0.5 metres of the recorded value 95.44% of the time.
2615So if the measurement is 7.34m then the actual length is very
2616likely to be between 6.84m and 7.84m. This example corresponds
2617to BCRA grade 3. Note that this is just one interpretation of
2618the BCRA standard, taking the permitted error values as 2SD 95.44%
2619confidence limits. If you want to take the readings as being some
2620other limit (e.g. 1SD = 68.26%) then you will need to change the BCRA3
2621and BCRA5 files accordingly. This issue is explored in more
2622detail in various surveying articles.
2623<!--
26242.565 sd 99%
26252.5   sd 98.76%
26262     sd 95.44%
26271     sd 68.26%
2628.97   sd 66.67%
26291.15  sd 75%
2630-->
2631</Para></listitem>
2632
2633</VarListEntry>
2634
2635<VarListEntry><Term>See Also</Term>
2636
2637<listitem><Para>*units</Para></listitem>
2638
2639</VarListEntry>
2640
2641</VariableList>
2642
2643</Sect3>
2644
2645<Sect3><Title>SET</Title>
2646
2647<VariableList>
2648
2649<VarListEntry><Term>Syntax</Term>
2650
2651<listitem><Para>*set &lt;item&gt; &lt;character list&gt;</Para></listitem>
2652
2653</VarListEntry>
2654
2655<VarListEntry><Term>Example</Term>
2656
2657<listitem>
2658<Para>
2659<programlisting>
2660*set blank x09x20
2661*set decimal ,</programlisting>
2662
2663Note that you need to eliminate comma from being a blank before setting it as
2664a decimal - otherwise the comma in "*set decimal ," is parsed as a blank, and
2665you set decimal to not have any characters representing it.
2666</Para>
2667</listitem>
2668
2669</VarListEntry>
2670
2671<VarListEntry><Term>Description</Term>
2672
2673<listitem><Para>
2674*set sets the specified &lt;item&gt; to the character or characters
2675given in &lt;character list&gt;. The example sets the decimal
2676separator to be a comma.
2677</Para>
2678
2679<Para>
2680xAB means the character with hex value AB. Eg x20 is a space.
2681</Para>
2682
2683<Para>
2684The complete list of items that can be set, the defaults (in
2685brackets), and the meaning of the item, is:
2686</Para>
2687
2688<ItemizedList>
2689
2690<ListItem><Para>
2691BLANK (x09x20,) Separates fields
2692</Para></ListItem>
2693
2694<ListItem><Para>
2695COMMENT (;) Introduces comments
2696</Para></ListItem>
2697
2698<ListItem><Para>
2699DECIMAL (.) Decimal point character
2700</Para></ListItem>
2701
2702<ListItem><Para>
2703EOL (x0Ax0D) End of line character
2704</Para></ListItem>
2705
2706<ListItem><Para>
2707KEYWORD (*) Introduces keywords
2708</Para></ListItem>
2709
2710<ListItem><Para>
2711MINUS (-) Indicates negative number
2712</Para></ListItem>
2713
2714<ListItem><Para>
2715NAMES (_-) Non-alphanumeric chars permitted in station
2716names (letters and numbers are always permitted).
2717</Para></ListItem>
2718
2719<ListItem><Para>
2720OMIT (-) Contents of field omitted (e.g. in plumbed legs)
2721</Para></ListItem>
2722
2723<ListItem><Para>
2724PLUS (+) Indicates positive number
2725</Para></ListItem>
2726
2727<ListItem><Para>
2728ROOT (\) Prefix in force at start of current file (use of ROOT is deprecated)
2729</Para></ListItem>
2730
2731<ListItem><Para>
2732SEPARATOR (.) Level separator in prefix hierarchy
2733</Para></ListItem>
2734
2735<!-- FIXME OPEN ({) and CLOSE (}) -->
2736</ItemizedList>
2737
2738<Para>
2739The special characters may not be alphanumeric.
2740</Para>
2741
2742</listitem>
2743
2744</VarListEntry>
2745
2746</VariableList>
2747
2748</Sect3>
2749
2750<Sect3><Title>SOLVE</Title>
2751
2752<VariableList>
2753
2754<VarListEntry><Term>Syntax</Term>
2755
2756<listitem><Para>*solve</Para></listitem>
2757
2758</VarListEntry>
2759
2760<VarListEntry><Term>Example</Term>
2761
2762<listitem>
2763<Para>
2764<programlisting>
2765*include 1997data
2766*solve
2767*include 1998data
2768</programlisting>
2769</Para>
2770</listitem>
2771
2772</VarListEntry>
2773
2774<VarListEntry><Term>Description</Term>
2775
2776<listitem><Para>
2777Distributes misclosures around any loops in the survey and fixes
2778the positions of all existing stations.  This command is intended
2779for situations where you have some new surveys adding extensions
2780to an already drawn-up survey which you wish to avoid completely
2781redrawing. You can read in the old data, use *SOLVE to fix it, and then
2782read in the new data.  Then old stations will be in the same
2783positions as they are in the existing drawn up survey, even if new loops
2784have been formed by the extensions.
2785</Para></listitem>
2786
2787</VarListEntry>
2788
2789</VariableList>
2790
2791</Sect3>
2792
2793<Sect3><Title>TEAM</Title>
2794
2795<VariableList>
2796
2797<VarListEntry><Term>Syntax</Term>
2798
2799<listitem><Para>*team &lt;person&gt; &lt;role&gt;...</Para></listitem>
2800
2801</VarListEntry>
2802
2803<VarListEntry><Term>Example</Term>
2804
2805<listitem>
2806<Para>
2807<programlisting>
2808*team "Nick Proctor" compass clino tape
2809*team "Anthony Day" notes pictures tape
2810</programlisting>
2811</Para>
2812</listitem>
2813
2814</VarListEntry>
2815
2816<VarListEntry><Term>Validity</Term>
2817
2818<listitem><Para>valid at the start of a *begin/*end block.
2819</Para></listitem>
2820<!-- FIXME valid roles are? -->
2821
2822</VarListEntry>
2823
2824<VarListEntry><Term>Description</Term>
2825
2826<listitem><Para>
2827*team specifies the people involved in a survey and what role they
2828filled during that trip.
2829</Para></listitem>
2830
2831</VarListEntry>
2832
2833<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2834
2835<VarListEntry><Term>See Also</Term>
2836
2837<listitem><Para>*begin, *date, *instrument</Para></listitem>
2838
2839</VarListEntry>
2840
2841</VariableList>
2842
2843</Sect3>
2844
2845<Sect3><Title>TITLE</Title>
2846
2847<VariableList>
2848
2849<VarListEntry><Term>Syntax</Term>
2850
2851<listitem><Para>*title &lt;title&gt;</Para></listitem>
2852
2853</VarListEntry>
2854
2855<VarListEntry><Term>Example</Term>
2856
2857<listitem>
2858<programlisting>
2859*title Dreamtime</programlisting>
2860
2861<programlisting>
2862*title "Mission Impossible"</programlisting>
2863</listitem>
2864
2865</VarListEntry>
2866
2867<VarListEntry><Term>Description</Term>
2868
2869<listitem><Para>*title allows you to set the descriptive title for a survey.
2870If the title contains spaces, you need to enclose it in quotes ("").
2871If there is no *title command, the title defaults to the survey name
2872given in the *begin command.
2873</Para>
2874</listitem>
2875
2876</VarListEntry>
2877
2878<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2879
2880<!--
2881<VarListEntry><Term>See Also</Term>
2882
2883<listitem><Para>*end, *prefix</Para></listitem>
2884
2885</VarListEntry>
2886-->
2887
2888</VariableList>
2889
2890</Sect3>
2891
2892<Sect3><Title>TRUNCATE</Title>
2893
2894<VariableList>
2895
2896<VarListEntry><Term>Syntax</Term>
2897
2898<listitem><Para>*truncate &lt;length&gt;|off</Para></listitem>
2899
2900</VarListEntry>
2901
2902<!-- FIXME:
2903<VarListEntry><Term>Example</Term>
2904
2905<listitem>
2906<programlisting>
2907</programlisting>
2908
2909</listitem>
2910
2911</VarListEntry>
2912-->
2913
2914<VarListEntry><Term>Description</Term>
2915
2916<listitem><Para>Station names may be of any length in <Application>Survex</Application>, but some
2917other (mostly older) cave surveying software only regard the first few
2918characters of a name as significant (e.g. "entran" and "entrance"
2919might be treated as the same).  To facilitate using data imported from
2920such a package <Application>Survex</Application> allows you to truncate names to whatever
2921length you want (but by default truncation is off).
2922</Para>
2923
2924<Para>Figures for the number of characters which are significant in various
2925software packages: Compass currently has a limit of 12,
2926CMAP has a limit of 6,
2927Smaps 4 had a limit of 8,
2928<!-- FIXME any limits for other software, winkarst for example? -->
2929Surveyor87/8 used 8.
2930<Application>Survex</Application> itself used 8 per prefix
2931level up to version 0.41, and 12 per prefix level up to 0.73 (more recent
2932versions removed this rather archaic restriction).
2933</Para>
2934</listitem>
2935
2936</VarListEntry>
2937
2938<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
2939
2940<!--
2941<VarListEntry><Term>See Also</Term>
2942
2943<listitem><Para>*end, *prefix</Para></listitem>
2944
2945</VarListEntry>
2946-->
2947
2948</VariableList>
2949
2950</Sect3>
2951
2952<Sect3><Title>UNITS</Title>
2953
2954<VariableList>
2955
2956<VarListEntry><Term>Syntax</Term>
2957
2958<listitem><Para>
2959*units &lt;quantity list&gt; [&lt;factor&gt;] &lt;unit&gt;
2960</Para>
2961<Para>
2962*units default
2963</Para></listitem>
2964
2965</VarListEntry>
2966
2967<VarListEntry><Term>Example</Term>
2968
2969<listitem>
2970<Para>
2971<programlisting>
2972*units tape metres</programlisting>
2973
2974<programlisting>
2975*units compass backcompass clino backclino grads</programlisting>
2976
2977<programlisting>
2978*units dx dy dz 1000 metres ; data given as kilometres</programlisting>
2979
2980<programlisting>
2981*units left right up down feet</programlisting>
2982</Para>
2983</listitem>
2984
2985</VarListEntry>
2986
2987<VarListEntry><Term>Description</Term>
2988
2989<listitem><Para>
2990&lt;quantity&gt; is one of the following (grouped entries are just alternative names for the same thing):
2991TAPE/LENGTH, COMPASS/BEARING, BACKCOMPASS/BACKBEARING, CLINO/GRADIENT, BACKCLINO/BACKGRADIENT, COUNTER/COUNT, DEPTH, DECLINATION, DX/EASTING, DY/NORTHING, DZ/ALTITUDE, LEFT, RIGHT, UP/CEILING, DOWN/FLOOR
2992</Para>
2993
2994<Para>Changes current units of all the quantities listed to [&lt;factor&gt;]
2995&lt;unit&gt;. Note that quantities can be expressed either as
2996the instrument (e.g. COMPASS) or the measurement (e.g. BEARING).
2997</Para>
2998
2999<Para>&lt;factor&gt; allows you to easy specify situations such as measuring
3000distance with a diving line knotted every 10cm (*units distance 0.1 metres).
3001If &lt;factor&gt; is omitted it defaults to 1.0.  If specified, it must be
3002non-zero.
3003</Para>
3004
3005<Para>Valid units for listed quantities are:
3006</Para>
3007
3008<Para>TAPE/LENGTH, COUNTER/COUNT, DEPTH, DX/EASTING, DY/NORTHING, DZ/ALTITUDE
3009in YARDS|FEET|METRIC|METRES|METERS (default: METRES)
3010</Para>
3011
3012<Para>CLINO/GRADIENT, BACKCLINO/BACKGRADIENT
3013in DEG|DEGREES|GRADS|MILS|PERCENT|PERCENTAGE (default: DEGREES)
3014</Para>
3015
3016<Para>COMPASS/BEARING, BACKCOMPASS/BACKBEARING, DECLINATION
3017in DEG|DEGREES|GRADS|MILS|MINUTES (default: DEGREES)
3018</Para>
3019
3020<Para>(360 degrees = 400 grads (also known as Mils))
3021</Para>
3022</listitem>
3023
3024</VarListEntry>
3025
3026<!-- <VarListEntry><Term>Caveats </Term> </VarListEntry> -->
3027
3028<VarListEntry><Term>See Also</Term>
3029
3030<listitem><Para>*calibrate</Para></listitem>
3031
3032</VarListEntry>
3033
3034</VariableList>
3035
3036</Sect3>
3037
3038</Sect2>
3039
3040</Sect1>
3041
3042<!-- FIXME rename to "Cookbook"? -->
3043<Sect1><Title>Contents of <filename>.svx</filename> files: How do I?</Title>
3044<?dbhtml filename="svxhowto.htm">
3045
3046<Para>
3047Here is some example <Application>Survex</Application> data (a very small cave numbered 1623/163):
3048</Para>
3049
3050<programlisting>
30512 1 26.60 222  17.5
30522 3 10.85 014   7
30532 4  7.89 254 -11
30544 5  2.98  - DOWN
30555 6  9.29 271 -28.5</programlisting>
3056
3057<Para>
3058You can vary the data ordering.  The default is:
3059</Para>
3060
3061<Para>
3062from-station to-station tape compass clino
3063</Para>
3064
3065<Para>
3066This data demonstrates a number of useful features of <Application>Survex</Application>:
3067</Para>
3068
3069<Para>
3070Legs can be measured either way round, which allows the use of
3071techniques like "leap-frogging" (which is where legs
3072alternate forwards and backwards).
3073</Para>
3074
3075<Para>
3076Also notice that there is a spur in the survey (2 to 3).  You
3077do not need to specify this specially.
3078</Para>
3079
3080<Para>
3081<Application>Survex</Application> places few restrictions on station naming (see "Survey
3082Station Names" in the previous section), so you can number the stations
3083as they were in the original survey notes.  Although not apparent from
3084this example, there is no requirement for each leg to connect to an
3085existing station.  <Application>Survex</Application> can accept data in any order, and will
3086check for connectedness once all the data has been read in.
3087</Para>
3088
3089<Para>
3090Each survey is also likely to have other information associated
3091with it, such as instrument calibrations, etc.  This has been
3092omitted from this example to keep things simple.
3093</Para>
3094
3095<Para>
3096Most caves will take more than just one survey trip to map.  Commonly
3097the numbering in each survey will begin at 1, so we need to be
3098able to tell apart stations with the same number in different
3099surveys.
3100</Para>
3101
3102<Para>
3103To accomplish this, <Application>Survex</Application> has a very flexible system of hierarchical
3104prefixes.  All you need do is give each survey a unique name or
3105number, and enter the data like so:
3106</Para>
3107
3108<programlisting>
3109*begin 163
3110*export 1
31112 1 26.60 222  17.5
31122 3 10.85 014   7
31132 4  7.89 254 -11
31144 5  2.98  - DOWN
31155 6  9.29 271 -28.5
3116*end 163</programlisting>
3117
3118<Para><Application>Survex</Application> will name the stations by attaching the current prefix.
3119In this case, the stations will be named 163.1, 163.2, etc.
3120</Para>
3121
3122<Para>We have a convention with the CUCC Austria data that the entrance survey
3123station of a cave is named P&lt;cave number&gt;, P163 in this case. We
3124can accomplish this like so:
3125</Para>
3126
3127<programlisting>
3128*equate P163 163.1
3129*entrance P163
3130*begin 163
3131*export 1
31322 1 26.60 222  17.5
31332 3 10.85 014   7
31342 4  7.89 254 -11
31354 5  2.98  - DOWN
31365 6  9.29 271 -28.5
3137*end 163</programlisting>
3138
3139<Sect2><Title>Specify surface survey data</Title>
3140
3141<Para>
3142Say you have 2 underground surveys and 2 surface ones with 2 fixed reference
3143points.  You want to mark the surface surveys so that their length isn't
3144included in length statistics, and so that Aven knows to display them
3145differently.  To do this you mark surface data with the "surface" flag
3146- this is set with "*flags surface" like so:
3147</Para>
3148
3149<programlisting>
3150; fixed reference points
3151*fix fix_a 12345 56789 1234
3152*fix fix_b 23456 67890 1111                                                     
3153                                                                               
3154; surface data (enclosed in *begin ... *end to stop the *flags command
3155; from "leaking" out)
3156*begin
3157*flags surface
3158*include surface1
3159*include surface2
3160*end                                                                           
3161                                                                               
3162; underground data
3163*include cave1
3164*include cave2</programlisting>
3165
3166<Para>
3167You might also have a survey which starts on the surface and heads into a
3168cave.  This can be easily handled too - here's an example which goes in
3169one entrance, through the cave, and out of another entrance:
3170</Para>
3171
3172<programlisting>
3173*begin BtoC
3174*title "161b to 161c"
3175*date 1990.08.06 ; trip 1990-161c-3 in 1990 logbook
3176
3177*begin
3178*flags surface
317902    01      3.09   249    -08.5
318002    03      4.13   252.5  -26
3181*end
3182
318304    03      6.00   020    +37
318404    05      3.07   329    -31
318506    05      2.67   203    -40.5
318606    07      2.20   014    +04
318707    08      2.98   032    +04
318808    09      2.73   063.5  +21
318909    10     12.35   059    +15
3190
3191*begin
3192*flags surface
319311    10      4.20   221.5  -11.5
319411    12      5.05   215    +03.5
319511    13      6.14   205    +12.5
319613    14     15.40   221    -14
3197*end
3198
3199*end BtoC</programlisting>
3200
3201<Para>
3202Note that to avoid needless complication, Survex regards each leg as
3203being either "surface" or "not surface" - if a leg spans the boundary you'll
3204have to call it one or the other.  It's good surveying practice to
3205deliberately put a station at the surface/underground interface
3206(typically the highest closed contour or drip line) so this generally
3207isn't an onerous restriction.
3208</Para>
3209
3210</Sect2>
3211
3212<Sect2><Title>Specify the ordering and type of data</Title>
3213
3214<Para>The *DATA command is used to specify the data style, and the
3215order in which the readings are given.</Para>
3216
3217</Sect2>
3218
3219<Sect2><Title>Deal with Plumbs or Legs Across Static Water</Title>
3220
3221<!-- FIXME
3222<Para>
3223They can be given
3224as +90, or -90, but as they are not usually measured with the
3225clino, but with a plumb of some sort, then it is useful to distinguish
3226them in this way so that any clino adjustment is not applied to
3227these values.
3228</Para>
3229
3230FIXME: paste in section from mail to list
3231
3232<Para>
3233Note that a similar effect can be achieved by using the "*infer plumbs" command
3234to stop clino corrections being applied to -90 and +90 clino readings.
3235</Para>
3236-->
3237
3238<Para>
3239Plumbed legs should be given using 'UP' or 'DOWN' in place of the
3240clino reading and a dash (or a different specified 'OMIT' character)
3241in place of the compass reading.  This distinguishes
3242them from legs measured with a compass and clino.  Here's an example:
3243</Para>
3244
3245<programlisting>
32461 2 21.54 - UP
32473 2 7.36 017 +17
32483 4 1.62 091 +08
32495 4 10.38 - DOWN</programlisting>
3250
3251<Para>
3252U/D or +V/-V may be used instead of UP/DOWN; the check is not case
3253sensitive.
3254</Para>
3255
3256<Para>
3257Legs surveyed across the surface of a static body of water where no
3258clino reading is taken (since the surface of the water can be assumed
3259to be flat) can be indicated by using LEVEL in place of a clino reading.
3260This prevents the clino correction being applied.  Here's an example:
3261</Para>
3262
3263<programlisting>
32641 2 11.37 190 -12
32653 2  7.36 017 LEVEL
32663 4  1.62 091 LEVEL</programlisting>
3267
3268</Sect2>
3269
3270<Sect2><Title>Specify a BCRA grade</Title>
3271
3272<Para>The *SD command can be used to specify the standard deviations of the
3273various measurements (tape, compass, clino, etc).  Examples files are
3274supplied which define BCRA Grade 3 and BCRA Grade 5 using a number of *sd
3275commands. You can use these by simply including them at the relevant point,
3276as follows:
3277</Para>
3278
3279<programlisting>
3280*begin somewhere
3281; This survey is only grade 3
3282*include grade3
32832 1 26.60 222  17.5
32842 3 10.85 014   7
3285; etc
3286*end somewhere</programlisting>
3287
3288<Para>The default values for the standard deviations are those for
3289BCRA grade 5. Note that it is good practice to keep the *include
3290Grade3 within *Begin and *End commands otherwise it will apply
3291to following survey data, which may not be what you intended.
3292</Para>
3293
3294</Sect2>
3295
3296<Sect2><Title>Specify different accuracy for a leg</Title>
3297
3298<Para>For example, suppose the tape on the plumbed leg in this survey
3299is suspected of being less accurate than the rest of the survey because
3300the length was obtained by measuring the length of the rope used to rig
3301the pitch.  We can set a higher sd for this one measurement and use a
3302*begin/*end block to make sure this setting only applies to the one
3303leg:
3304</Para>
3305
3306<programlisting>
33072 1 26.60 222  17.5
33082 3 10.85 014   7
33092 4  7.89 254 -11
3310*begin
3311; tape measurement was taken from the rope length
3312*sd tape 0.5 metres
33134 5  34.50 - DOWN
3314*end
33155 6  9.29 271 -28.5</programlisting>
3316
3317<!-- FIXME also *calibrate and *instrument? Except rope is measure with the
3318tape... -->
3319</Sect2>
3320
3321<Sect2><Title>Enter Repeated Readings</Title>
3322
3323<Para>If your survey data contains multiple versions of each leg (for example,
3324pockettopo produces such data), then provided these are adjacent to one another
3325Survex 1.2.17 and later will automatically average these and treat them as a
3326single leg.
3327</Para>
3328
3329</Sect2>
3330
3331<Sect2><Title>Enter Radiolocation Data</Title>
3332
3333<!-- FIXME comments from David Gibson here -->
3334<Para>This is done by using the *SD command to specify the appropriate
3335errors for the radiolocation `survey leg' so that the loop closure
3336algorithm knows how to distribute errors if it forms part of a loop.
3337</Para>
3338
3339<Para>The best approach for a radiolocation where the underground station
3340is vertically below the surface station is to represent it as a
3341plumbed leg, giving suitable SDs for the length and plumb angle. The
3342horizontal positioning of this is generally quite accurate, but the
3343vertical positioning may be much less well known. E.g: we have a
3344radiolocation of about 50m depth +/- 20m and horizontal accuracy of
3345+/- 8m. Over 50m the +/-8m is equivalent to an angle of 9 degrees, so
3346that is the expected plumb error. 20m is the expected error in the
3347length. To get the equivalent SD we assume that 99.74% of readings will
3348be within 3 standard deviations of the error value. Thus we divide the
3349expected errors by 3 to get the SD we should specify:
3350</Para> <!-- 3 SD? or same as BCRA3.SVX, etc -->
3351
3352<programlisting>
3353*begin
3354*sd length 6.67 metres
3355*sd plumb 3 degrees
3356surface underground 50 - down
3357*end</programlisting>
3358
3359<Para>
3360We wrap the radiolocation leg in a *begin/*end block to make
3361sure that the special *sd settings only apply to this one leg.
3362</Para>
3363
3364<Para>For more information on the expected errors from radiolocations
3365see Compass Points Issue 10, available online at
3366<ulink url="http://www.chaos.org.uk/survex/cp/CP10/CPoint10.htm">http://www.chaos.org.uk/survex/cp/CP10/CPoint10.htm</ulink>
3367</Para>
3368
3369</Sect2>
3370
3371<Sect2><Title>Enter Diving Data</Title>
3372
3373<Para>Surveys made underwater using a diver's depth gauge can be
3374processed - use the *Data command to specify that the following data
3375is of this type.
3376</Para>
3377
3378</Sect2>
3379
3380<Sect2><Title>Enter Theodolite data</Title>
3381
3382<Para>
3383Theodolite data with turned angles is not yet explicitly catered
3384for, so for now you will need to convert it into equivalent legs in
3385another style - normal or cylpolar are likely to be the best choices.
3386</Para>
3387
3388<Para>
3389If there is no vertical info in your theodolite data then you should
3390use the cylpolar style and use *sd command to specify very low
3391accuracy (high SD) in the depth so that the points will move in the
3392vertical plane as required if the end points are fixed or the survey
3393is part of a loop.
3394</Para>
3395
3396</Sect2>
3397
3398</Sect1>
3399
3400<Sect1><Title>General: How do I?</Title>
3401<?dbhtml filename="genhowto.htm">
3402
3403<Sect2><Title>Create a new survey</Title>
3404
3405<Para>You simply create a text file containing the relevant survey data,
3406using a text editor, and save it with a suitable name with a <filename>.svx</filename>
3407extension. The
3408easiest way is to look at some of the example data and use that
3409as a template. Nearly all surveys will need a bit of basic info
3410as well as the survey data itself: e.g. the date (*date), comments
3411about where, what cave, a name for the survey (using *begin and *end),
3412instrument error corrections etc. Here is a typical survey file:
3413</Para>
3414
3415<Para>All the lines starting with ';' are comments, which are ignored
3416by <Application>Survex</Application>. You can also see the use of 'DOWN' for plumbs, and
3417*calibrate tape for dealing with a tape length error (in this case
3418the end of the tape had fallen off so measurements were made from the
341920cm point).</Para>
3420
3421<programlisting>
3422*equate chaos.1 triassic.pt3.8
3423*equate chaos.2 triassic.pt3.9
3424
3425*begin chaos
3426*title "Bottomless Pit of Eternal Chaos to Redemption pitch"
3427*date 1996.07.11
3428*team "Nick Proctor" compass clino tape
3429*team "Anthony Day" notes pictures tape
3430*instrument compass "CUCC 2"
3431*instrument clino "CUCC 2"
3432;Calibration: Cairn-Rock 071 072 071,  -22 -22 -22
3433;       Rock-Cairn 252 251 252,  +21 +21 +21
3434;Calibration at 161d entrance from cairn nr entrance to
3435;prominent rock edge lower down. This is different from
3436;calibration used for thighs survey of 5 July 1996
3437
3438*export 1 2
3439
3440;Tape is 20cm too short
3441*calibrate tape +0.2
3442
34431 2 9.48 208 +08
34442 3 9.30 179 -23
34453 4 2.17 057 +09
34465 4 10.13 263 +78
34475 6 2.10 171 -73
34487 6 7.93 291 +75
3449*begin
3450*calibrate tape 0
34518 7 35.64 262 +86 ;true length measured for this leg
3452*end
34538 9 24.90 - DOWN
345410 9 8.61 031 -43
345510 11 2.53 008 -34
345611 12 2.70 286 -20
345713 12 5.36 135 +23
345814 13 1.52 119 -12
345915 14 2.00 036 +13
346016 15 2.10 103 +12
346117 16 1.40 068 -07
346217 18 1.53 285 -42
346319 18 5.20 057 -36
346419 20 2.41 161 -67
346520 21 27.47 - DOWN
346621 22 9.30 192 -29
3467*end chaos</programlisting>
3468
3469</Sect2>
3470
3471<Sect2><Title>Join surveys together</Title>
3472
3473<Para>Once you have more than one survey you need to specify how they
3474link together. To do this use *export to make the stations to be
3475joined accessible in the enclosing survey, then *equate in the
3476enclosing survey to join them together.
3477<!-- FIXME example -->
3478</Para>
3479
3480</Sect2>
3481
3482<Sect2><Title>Organise my surveys</Title>
3483
3484<Para>This is actually a large subject. There are many ways you can
3485organise your data using <Application>Survex</Application>. Take a look at the example dataset
3486for some ideas of ways to go about it.
3487</Para>
3488
3489<Sect3><Title>Fixed Points (Control Points)</Title>
3490
3491<Para>The *fix command is used to specify fixed points (also know as control
3492points).  See the description of this command in the "Cavern Commands"
3493section of this manual.
3494</Para>
3495
3496</Sect3>
3497
3498<Sect3><Title>More than one survey per trip</Title>
3499
3500<Para>Suppose you have two separate bits of surveying which were done on the
3501same trip.  So the calibration details, etc. are the same for both.  But you
3502want to give a different survey name to the two sections.  This is easily
3503achieved like so:
3504</Para>
3505
3506<programlisting>
3507*begin
3508*calibrate compass 1.0
3509*calibrate clino 0.5
3510*begin altroute
3511; first survey
3512*end altroute
3513*begin faraway
3514; second survey
3515*end faraway
3516*end</programlisting>
3517
3518</Sect3>
3519
3520</Sect2>
3521
3522<Sect2><Title>Add surface topography</Title>
3523
3524<Para>Survex 1.2.18 added support for loading terrain data and rendering it as
3525a transparent surface.
3526</Para>
3527
3528<Para>
3529We recommend using this new code in preference, but previously the simplest
3530approach was to generate a <filename>.svx</filename> file with the surface mesh
3531in and display it with the survey data.
3532</Para>
3533
3534<Para>
3535It is possible to generate
3536a mesh or contours overlaying your area by various means.  NASA have made
35371 arc-second (approximately 30m) terrain data available for the USA for
3538some years, with only 3 arc-second data available for other countries.
3539However, starting in 2014 they're gradually making 1 arc-second data
3540available for more countries.
3541</Para>
3542
3543<Para>
3544If you want a better resolution that this, reading heights from the
3545contours on a map is one approach.  It's laborious, but feasible for
3546a small area.
3547</Para>
3548
3549<Para>
3550Details of several methods are given in the BCRA Cave Surveying
3551Group magazine Compass Points issue 11, available online at
3552<ulink url="http://www.chaos.org.uk/survex/cp/CP11/CPoint11.htm#Art_5">http://www.chaos.org.uk/survex/cp/CP11/CPoint11.htm#Art_5</ulink>
3553</Para>
3554
3555<Para>If you're using another program to generate a <filename>.svx</filename> file for the surface
3556mesh, it's best to use the NOSURVEY data style.
3557Simply fix all the grid intersections at the correct
3558coordinates and height, and put legs between them using the NOSURVEY style.
3559Here's a grid of 4 squares and 9 intersections:
3560</Para>
3561
3562<programlisting>
3563*fix 00 000 000 1070
3564*fix 01 000 100 1089
3565*fix 02 000 200 1093
3566
3567*fix 10 100 000 1062
3568*fix 11 100 100 1080
3569*fix 12 100 200 1089
3570
3571*fix 20 200 000 1050
3572*fix 21 200 100 1065
3573*fix 22 200 200 1077
3574
3575*data nosurvey station
3576
357700
357801
357902
3580
358110
358211
358312
3584
358520
358621
358722
3588
358900
359010
359120
3592
359301
359411
359521
3596
359702
359812
359922</programlisting>
3600
3601<Para>
3602This is far simpler than trying to create fake tape/compass/clino legs of
3603the right length for each line in the mesh.  It's also very fast to process
3604with cavern.
3605</Para>
3606
3607</Sect2>
3608
3609<Sect2><Title>Overlay a grid</Title>
3610
3611<Para>Aven is able to display a grid, but this functionality isn't currently
3612available in printouts.
3613You can achieve a similar effect for now by creating a <filename>.svx</filename> file
3614where the survey legs form a grid.
3615</Para>
3616
3617</Sect2>
3618
3619<Sect2><Title>Import data from other programs</Title>
3620
3621<Para><Application>Survex</Application> supports a number of features to help with importing
3622existing data. You can specify the ordering of items on a line using *Data
3623(see <Application>Survex</Application> Keywords above), and you can specify the characters used
3624to mean different things using *Set (see <Application>Survex</Application> Keywords above).
3625</Para>
3626
3627<Para>The Ignore and Ignoreall options to the *Data command are often
3628particularly useful, e.g. if you have a dataset with LRUD info or comments
3629on the ends of lines.
3630</Para>
3631
3632<Sect3><Title>Changing Meanings of Characters</Title>
3633
3634<Para>e.g. if you have some data with station names containing the
3635characters '?' and '+' (which are not permitted in a name by default)
3636then the command:
3637</Para>
3638
3639<programlisting>
3640*SET NAMES ?+</programlisting>
3641
3642<Para>
3643specifies that question marks and plus signs are permitted in station names.
3644A-Z, a-z, and 0-9 are always permitted. '_' and '-' are also permitted by
3645default, but aren't in this example.
3646</Para>
3647
3648<Para>If your data uses a comma ',' instead of a decimal point, then
3649you use
3650</Para>
3651
3652<programlisting>
3653*SET DECIMAL ,</programlisting>
3654
3655<Para>to specify that ',' is now the decimal separator instead of '.'.
3656</Para>
3657
3658<!-- FIXME
3659<Para>Note that there are plenty of ways you can use this facility to
3660completely confuse the software, as it may not be able to work out what is
3661going on, or it may simply be ambiguous. It can cope with some ambiguity (e.g.
3662the '-' character is used both for 'MINUS' and for 'OMIT'), but there are
3663limits. If you have a dataset that you can not make <Application>Survex</Application>
3664understand, then send it to us, and we will see what can be done.
3665</Para>
3666-->
3667
3668</Sect3>
3669
3670<!--
3671 Nobody seems to have the CfH convertor...
3672 but it's probably no longer useful anyway
3673
3674<Sect3><Title>Other Converters</Title>
3675
3676<Para>We have an Excel 5 macro for converting The Lotus 123 spreadsheets
3677used by the German survey software Cad F&uuml;r H&ouml;hlen into
3678<Application>Survex</Application> data files. Other converters may also come to be available.
3679These will normally be available via the
3680<ulink url="http://survex.com/"><Application>Survex</Application> Web pages</ulink>.
3681</Para>
3682
3683</Sect3>
3684-->
3685
3686</Sect2>
3687
3688<Sect2><Title>Export data from <Application>Survex</Application></Title>
3689
3690<Para>See Rosetta Stal in the Related Tools section of the Survex web
3691site.  This is a utility written by Taco van Ieperen and Gary Petrie.
3692Note though that this only supports a subset of the svx format,
3693and only work on Microsoft Windows.  The Survex support is limited
3694and doesn't understand the more recently added commands.</Para>
3695
3696</Sect2>
3697
3698<Sect2><Title>See errors and warnings that have gone off the screen</Title>
3699
3700<Para>When you run <Application>Survex</Application> it will process the specified survey data
3701files in order, reporting any warnings and errors.  If there are no
3702errors, the output files are written and various statistics about the
3703survey are displayed. If there are a lot of warnings or errors, they can
3704scroll off the screen and it's not always possible to scroll back to
3705read them.
3706</Para>
3707
3708<Para>The easiest way to see all the text is to use <command>cavern
3709--log</command> to redirect output to a <filename>.log</filename> file,
3710which you can then inspect with a text editor.
3711</Para>
3712
3713<!-- <command>cavern cavename &gt; tmpfile</command> -->
3714
3715</Sect2>
3716
3717<Sect2><Title>Create an Extended Elevation</Title>
3718
3719<Para>Use the Extend program. This takes <filename>.3d</filename> files and
3720'flattens' them.  See 'Extend' for details.
3721</Para>
3722
3723</Sect2>
3724
3725</Sect1>
3726
3727<!--
3728<Sect1><Title>Appendices</Title>
3729<?dbhtml filename="appendix.htm">
3730
3731<Para>Files provided
3732</Para>
3733
3734<Para>Command specification
3735</Para>
3736
3737</Sect1>
3738-->
3739<Sect1><Title>Working with Larry Fish's Compass</Title>
3740<?dbhtml filename="compass.htm">
3741
3742<Para>
3743Survex can read Compass survey data - both raw data (.DAT and .MAK
3744files) and processed survey data (.PLT and .PLF files).  You can even
3745use <command>*include compassfile.dat</command> in a <filename>.svx</filename> file and
3746it'll work!
3747</Para>
3748
3749<Para>
3750One point to note (this tripped us up!): station names in DAT files are
3751case sensitive and so Survex reads DAT files with the equivalent of
3752<command>*case preserve</command>.  The default in SVX files is
3753<command>*case lower</command>.  So this won't work:
3754
3755<programlisting>
3756*fix CE1 0 0 0
3757*include datfilewhichusesCE1.dat</programlisting>
3758
3759Because the CE1 in the *fix is actually interpreted as ce1.  This is
3760what you have to do:
3761
3762<programlisting>
3763*begin
3764*case preserve
3765*fix CE1 0 0 0
3766*include datfilewhichusesCE1.dat
3767*end</programlisting>
3768</Para>
3769
3770</Sect1>
3771
3772<Sect1><Title>Mailing List</Title>
3773<?dbhtml filename="maillist.htm">
3774
3775<Para>The best way to contact the authors and other Survex users is the
3776Survex mailing list - for details visit:
3777<ulink url="http://survex.com/maillist.html">http://survex.com/maillist.html</ulink>
3778</Para>
3779
3780<Para>We'd be delighted to hear how you get on with <Application>Survex</Application> and
3781welcome comments and suggestions for improvements.</Para>
3782
3783<Para>
3784And we'd love you to contribute your skills to help make <Application>Survex</Application> even
3785better.  Point out areas of the documentation which could be made clearer, or
3786sections which are missing entirely.  Download test releases, try them out, and
3787let us know if you find problems or have suggestions for improvements.
3788If there's no translation to your language, you could provide one.
3789Or if your a developer, <emphasis>"Say it with code"</emphasis>.  There's
3790plenty to do, so feel free to join in.
3791</Para>
3792
3793</Sect1>
3794
3795<Sect1><Title>Future Developments</Title>
3796<?dbhtml filename="future.htm">
3797
3798<Para>
3799Now that <Application>Survex</Application> has reached version 1.0, we are continuing progress
3800towards version 2, in a series of steps, evolving out of
3801Survex 1.0.  The GUI framework is being based on aven, with
3802the printer drivers and other utility programs being pulled in
3803and integrated into the menus.</Para>
3804
3805<Para>Aven is built on <Application>wxWidgets</Application>, which means that it can easily support
3806Unix, Microsoft Windows, and Mac OS X.</Para>
3807
3808<Para>More information on our plans is on the <ulink
3809url="http://survex.com/">web site</ulink>.
3810</Para>
3811
3812</Sect1>
3813
3814</article>
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